Pelagerythrobacter marensis: AM2010_593
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Entry
AM2010_593 CDS
T03951
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03030
DNA replication
amx03430
Mismatch repair
amx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AM2010_593
03430 Mismatch repair
AM2010_593
03440 Homologous recombination
AM2010_593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amx03032
]
AM2010_593
03400 DNA repair and recombination proteins [BR:
amx03400
]
AM2010_593
Enzymes [BR:
amx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AM2010_593
DNA replication proteins [BR:
amx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AM2010_593
DNA repair and recombination proteins [BR:
amx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AM2010_593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
COE1_HLH
T2SSK
DUF655
Scaffold
Motif
Other DBs
NCBI-ProteinID:
AKM06679
UniProt:
A0A0G3X7V3
LinkDB
All DBs
Position
616311..619784
Genome browser
AA seq
1157 aa
AA seq
DB search
MSFAPFVPLRVLSSYSMLEGAIDPKAIAKLAKERGFPAIAICDRNGLYGAVMFAKACFDE
GIQPIIGTLLGVARDAEGKRIDYLPLYAQDETGWDNLCHLVSRAHLDRSLELEPHVAMGD
FDGRTDGLIALTGASEGPLTRLLAEGQNDHAEALLERLEGLFPGRLYIELARRDDPVENA
AEDALVDLAYRRDLPLVATNPANFAEPHMYHAHDAMLCIAGSTHIEAEDRARSNREAWVK
PADMMAEMFDDLPEATANTLVVAQRCAFAPPNRAPILPSLAGDLEGEARMLADDARKGLE
ARLSAYEDLSEEERKVYFERLDFEVDIIVGMGFPGYFLIVADFIKWAKEQDIPVGPGRGS
GAGSLVAWSLTITDLDPIRLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQRKYGH
DHVAQIITFGKLKARAVLRDCGRILQMSYGHVDRLCKMVPNHPTDPWTLPRALNGAADFK
REYDNDNDVKRLVDLAMQLEGFPRNSSTHAAGVVIGDRPLAKLVPLYRDPRSDMPVTQFD
MKHVESSGLVKFDFLGLKTLSVLQKAVQLLEKRGITVDLGQLAWDDPAVYELLKRGDTVG
VFQLESEGMRRTLTAVKPTKFEDIIALVSLYRPGPMDNIPLFGKRKGGEVPIEYPHPKLE
QILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDAQRERFVEGCKAV
SGIEAKQANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFYAASMCFDMHQ
SEKLALFVDDARRGGVEVRTPDVNRSEAEFTVERTDEGYAVRYALAGIRNVGEKAMEALV
AEREANGWFESLQDLFERVPKGSMNSRQLEGLICAGALDSLDPDRGRLFANIDMLLAIAD
AANRERESGQAGLFGGEEAAGDTLRLKEAEPWSRSDRMANERENFGFYFSAHPVEQYRAI
ASANGARSYQSLMEGGGPAGGRQPAVMAAMVEKVNKGRTRRGGEFVRADFSDSTGQFSAA
CFEESLVESFQKWATEGTCVLLNVELDSPSPDEPPRVTVRGARPLDDVKSGSRMVLSMDV
SATEALTELKMALAIGTPGHGEVYVRLKTGMGEEPLLRLGRDYQIDGELAERLAEVPGLD
NVSLTTRRGAGNLRLVA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgcccccttcgttccccttcgcgtgctttcgtcctattcgatgctcgaaggc
gcgatcgatccgaaggcgatcgccaagctggcgaaggaacgcggcttccccgcaatcgca
atctgcgaccgcaatggcctctacggcgcggtcatgttcgccaaggcctgtttcgacgag
ggtatccagccgatcatcggcaccctgctgggcgtggcgcgcgatgccgaaggcaagcgg
atcgattacctgccgctctatgcccaggatgaaaccgggtgggacaatctgtgccatctg
gtcagccgcgcgcacctcgaccgttcgctggaactggaaccccatgtcgcgatgggcgac
ttcgacgggaggaccgatggcctgatcgcgctgaccggcgcgagcgaggggccgctgacg
cgccttctggcggaagggcagaacgatcatgccgaggcgctgctggaacggctggagggg
ctgtttcccggaaggctctatatcgaactggcccggcgcgacgatccggtggagaacgcg
gcggaagacgcgctggtcgacctcgcctatcgccgcgacctgccgctggtggcgaccaac
ccggccaatttcgccgagccgcacatgtaccatgcgcacgacgccatgctgtgcatcgcc
gggtcgacccatatcgaggcggaagaccgcgcgcgctccaaccgtgaggcatgggtgaag
ccggccgacatgatggccgagatgttcgacgacttgcccgaggcgacggccaataccctc
gtcgtcgcgcagcgctgtgccttcgcgccgcctaaccgcgccccgatcctgcccagcctg
gccggcgatctggaaggcgaggcgcggatgctggcggatgacgcgcgcaaggggctggag
gcacgcctttcggcctacgaggatctgagcgaggaagagcgcaaggtctatttcgaacgg
ctcgatttcgaagtcgacatcatcgtcggcatgggctttcccggctacttcctgatcgtt
gccgacttcatcaagtgggccaaggaacaggacattcccgtcgggccggggcgtggttcg
ggcgcgggcagcctggtcgcctggtcgctgacgatcaccgatctcgacccgatccggctg
gggctgctgttcgaacgcttcctcaaccccgagcgcgtttcgatgccggacttcgacatc
gacttctgcgaaacccgccgcggcgaagtgatccgttatgttcagcgcaaatatggccac
gatcacgtcgcgcagatcatcaccttcggcaagctgaaggcgcgcgccgtgctgcgcgat
tgcgggcgcatccttcagatgagctacggccacgtcgaccggttgtgcaagatggtgccc
aaccacccgaccgacccctggaccctgccgcgcgcgctgaacggcgcggccgatttcaag
cgcgagtacgacaacgacaacgatgtgaagcgcctcgtcgatctggcgatgcagctggaa
gggttcccgcgcaacagctcgacccacgcggccggcgtggtgatcggcgaccggccgctg
gccaaactggttccgctctaccgcgatccgcgctcggacatgccggtgacgcagttcgac
atgaagcacgtggaaagctcgggcctggtcaagttcgacttcctcgggctcaagaccctg
tcggttctgcaaaaggcggtgcaactgctcgaaaagcgggggatcacggtcgatctgggc
cagctcgcgtgggacgatccggcggtttacgaactgctcaagcgcggcgacacggtcggt
gtgttccagctcgaatccgaagggatgcggcgcacgctgaccgcggtgaagccgaccaag
ttcgaagacatcatcgcgctcgtctcgctctaccgtcccggcccgatggacaacatcccg
ctgttcggcaagcgcaagggcggcgaagtgccgatcgagtatccgcaccccaagctggag
cagattctcgccgaaacctacggcattttcgtctaccaggaacaggtcatgcaggcggcg
cagatccttgccggctattcgctcggcgatgccgacctgctgcgccgcgccatgggcaag
aaagtccaggcggaaatggacgcccagcgcgaacgcttcgtcgaagggtgcaaggcggtt
tctgggatcgaggcgaagcaggcgaacgagctgttcgacttgatcgacaagttcgccggc
tacggtttcaacaagtcgcacgccgccgcctatgcgctgctcgcctaccagaccgcatgg
ctcaaggcgcattaccctgaggagttctacgccgcttcgatgtgtttcgacatgcaccag
tcggaaaagctggcgctgttcgtggacgacgcgcggcgcggcggggtcgaggtgcgcacg
cccgatgtcaaccggtcggaagcggaattcaccgtcgagcggaccgacgaaggctatgcc
gtgcgctatgccctggcgggcattcgcaacgtcggcgaaaaggcgatggaggcgctggtt
gccgagcgcgaggcgaatggctggttcgaaagcctgcaggacctgttcgagcgggtgccc
aaggggtcgatgaacagccgccagctcgaaggcctgatctgcgccggcgcgctcgacagc
ctcgatcccgaccggggcagactgtttgccaatatcgacatgctgctggccattgccgat
gccgccaaccgcgagcgtgaaagcgggcaggcggggctgttcggcggcgaggaggccgcc
ggcgacaccttgcggctgaaagaggccgagccgtggagccgttccgaccgcatggcgaac
gagcgggagaacttcggcttctatttctctgcccatccggtggagcagtaccgcgccatt
gccagcgccaacggcgcgcgcagttaccagagcctgatggaaggcggcggcccggcgggc
gggcgtcagccggcggtgatggcggcgatggtggagaaagtgaacaagggccgcacccgc
cgcgggggcgaattcgtgcgcgccgatttctccgacagcacgggccagttcagcgccgcc
tgtttcgaggaatcgctggtcgaaagctttcagaaatgggcgaccgagggcacctgcgtc
ctgctcaacgtcgaactcgacagccccagcccggacgagccgccgcgcgtcaccgtgcgc
ggcgcgcgcccgctcgatgacgtcaagagcggatcgcgcatggtcctctcgatggacgtt
tcagcgaccgaagccctgaccgaactgaagatggcactggcaatcggcacgccgggccac
ggtgaggtctacgtccggctgaagaccggaatgggcgaggaacctttgctgcgtctgggc
cgcgattatcagatcgacggcgaactggcggagcggctggccgaagtacccgggctagac
aacgtctcgctcaccacccgtcgcggcgcaggaaacttgcggctcgtcgcctga
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