Pelagerythrobacter marensis: AM2010_794
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Entry
AM2010_794 CDS
T03951
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03410
Base excision repair
amx03430
Mismatch repair
amx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AM2010_794
03430 Mismatch repair
AM2010_794
03440 Homologous recombination
AM2010_794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amx03400
]
AM2010_794
DNA repair and recombination proteins [BR:
amx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AM2010_794
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AM2010_794
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AM2010_794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AKM06874
UniProt:
A0A0G3X8C8
LinkDB
All DBs
Position
complement(821653..823440)
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AA seq
595 aa
AA seq
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MASHSLSNVFGIERSLSGKAWRWRGGNMALGSDGAALEDDIVAQLLLSRGVVREDLDRHR
APTLRAFLPDPSVFRDMEVAAERIAQAVLGGETITIYGDYDVDGATSSALLIRLLRMLGH
DAGHYIPDRLLEGYGPSGEALVRLAEQGSSLIVTVDCGAMAHEALAMAHDAGVDVIVVDH
HKCSSELPKAAALVNPNRLDECDLAAQHGHLAAVGVAFLLAVAVVRTLRARAYFEARPEP
DLRGLLDLVALGTVADVAALHGLNRAFVAQGLKVMAKRQNVGMSALIDASRLTRAPICSD
LGFALGPRINAGGRVGESTLGVRLLTTEDVHEAQAIAAQLSALNEERRAIEAAVQEAAEA
QLAGQHNRAVCVLAGTGWHPGVIGIVAGRIKEKTGKPAIVIALDEAQGQGKGSGRSISGV
DLGAAIIAAREAGLLVAGGGHAMAAGLTIESDQFDAFADWLNARLAGAVERASAQQTLSL
DLSLAPGGLTPELVETLEHAGPFGVGWPGPKLAVGPVRLIKADVVGTNHVRLIAGGDDGR
SFKAIGFRMAESDLGQSLLHGARGRRLWLAGRAKIDDWGARPAAELHLEDAAWAD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcactcgctttccaacgtcttcgggatcgaacggtcgctttcgggcaaggca
tggcgctggcgcggcggaaacatggcgctcggcagcgatggtgccgcgctcgaagacgat
atcgtcgcacaattgctgctgtcgcgcggcgtggttcgcgaagatctggatcgccatcgc
gcgccgaccttgcgcgcgttcctgcccgacccttcggtgtttcgcgacatggaggtggcg
gccgaacgcatcgcgcaggcggtgctcggcggggaaacaatcacgatctacggcgactac
gatgtcgacggggcgacgagttcggcgctgctgattcgcctcctgcggatgctgggtcac
gacgccgggcattacatccccgatcgcctgctggaaggttacggcccgagcggcgaagcg
cttgtccggctggcggaacagggatcgagcctgatcgtgaccgtggattgcggggcgatg
gcgcacgaggcactggcgatggcacacgatgccggcgtcgacgtgatcgtggtcgatcac
cacaagtgctcatccgaactgcccaaggccgcggcgctggtgaatccgaatcgcctcgac
gaatgcgaccttgcggcgcagcatggccatcttgccgccgtcggcgtggcattcctgctc
gcagtggcagtggtgcgtaccttgcgcgcacgcgcctatttcgaggcccggcccgaaccg
gacctgcgcggtctgctcgatctcgttgcgctcggcaccgtcgccgatgtcgcggctctc
cacgggttgaaccgcgctttcgtggcgcaagggctgaaggtgatggcgaagcggcaaaac
gtcggcatgtccgcgttgatcgacgcaagccggttgacccgcgcgccgatctgcagcgat
ctgggtttcgcactgggaccacgcatcaacgccggcggccgcgtgggcgaatcgacgctg
ggcgtccgcctgctgacgaccgaagacgtacacgaagcgcaggcaatcgccgcccagctt
tcggcgctcaacgaagaacgtcgcgcgatagaggcggcggtccaggaagcagccgaggcg
cagcttgccggccagcacaatcgcgctgtctgcgtactggcggggaccggatggcatccg
ggggtcatcggtatcgtggccgggcggataaaggaaaagacgggcaagccggcaatcgtg
atcgcgctcgatgaagcgcagggccagggcaagggatcgggccggtcgatctctggcgtc
gatcttggtgcggccattatcgccgcgcgggaggccgggttgctggtggccgggggcggt
catgcaatggcggccgggctgacgatcgaatcggaccagttcgatgcatttgccgactgg
ctgaacgcgcggctcgccggggcggttgaacgggccagcgcccagcagacgctctcgctc
gatctgtcgctggcgcctggggggctgacaccggaactggtcgaaacgctggagcatgcg
gggccgttcggggtcggctggcctgggcccaagctcgcggtcggcccggttcgactgatc
aaggctgatgtggtcggcaccaatcacgtccgcctgatcgccgggggcgacgacgggcga
tcgttcaaggcgatcgggtttcgcatggcggaaagcgatctcggccagtcgctgcttcac
ggtgcaaggggccggcggctctggctggcagggcgcgcgaagatcgacgattggggcgca
cgccctgcggctgaacttcatctggaggacgccgcctgggccgattga
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