Schaalia meyeri: ADJ76_00305
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Entry
ADJ76_00305 CDS
T04027
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amy
Schaalia meyeri
Pathway
amy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ADJ76_00305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amy03021
]
ADJ76_00305
03400 DNA repair and recombination proteins [BR:
amy03400
]
ADJ76_00305
Enzymes [BR:
amy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ADJ76_00305
Transcription machinery [BR:
amy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ADJ76_00305
DNA repair and recombination proteins [BR:
amy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ADJ76_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKU64412
UniProt:
A0AAP9Y609
LinkDB
All DBs
Position
71426..75328
Genome browser
AA seq
1300 aa
AA seq
DB search
MLDAKTFDSLKITLATGDDIAEWSHGEVKKPETINYRTLKPERDGLFGEQIFGPTRDWEC
ACGKYKRVRYKGIICEKCGVEVTRSRVRRERMGHIDLAAPVTHIWYFKGVPSRLGYVLNL
APKDLEKVIYFAAYMITEVDEKGRHEDLAELRAELEVQKKQMENNRDATINDFAEQLESD
VAALEKDGASQAERERARKQGEREMAKIRRRFDGDIDGLEAVWERFKDLKVGDLEGDERL
YRAMVARYGTYFKGDMGAAAIQKRLETFDLEGEVAALRQTIASDSGPRKARAIKRLKVIN
AFVATGNSPASMVLTKIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNTRLKRLLEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVAGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLQLHQCGLPKQMALELFKPFVMKRLVEKNYAQNVKAAKRKVERQR
PEVWDVLDDVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLACGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSTNNILKPSDGRPVAMPSQDMIIGLFHLTSTPDPSVPVET
DEDGNPVVPYFSSQAEAQMAFDAGNLDLNATARIRFADGTVPPEGWEAPEGWEAGDDLIL
ETSLGRAIFNEQLPTDYPFVNEVVGKKQLGNIVNTLTQRYPNVLVADCLDALKSAGFHWS
TWSGITIAFSDIQASPRKREILARYEAKAAEIVEQFETGIILEETRYEELVKLWLQCTEE
VADDMRSNFSERNTVYRMVNSGARGNWSQVQQIAGMRGLVSDPKQKLIEQPIKANYREGL
TVLEYFIATHGARKGLVDTALRTAESGYLTRRLVDVSQDVIVREADCGTRAGLKIDIAHR
NDMGEWEASETIETTAYARNLARDAVNEAGEVVLPAGTDLGDDQLAQLVEAGVEQIVCRS
VLTCESAVGTCAACYGRSLATGKQVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASAA
DITQGLPRVQELFEARSPKVEAKMNEAAGRVHINDEDPSARKVVITRDDGKEDLVIEVSR
RQKMLVSEGQHIKAGTPLTEGQLDPKEILRIMGRNVSQKMLVDEVQKVYRDQGVGIHAKH
IEVIVRQMLRRVTILEPGDTSFMPGELVDRMAYLTQNRRVAAEGGQPASGRQMLMGITKA
SLATDSWLSAASFQETTKVLTEAAMNGKSDSLVGLKENVILGKLIPAGTGLSRYNDVIVE
PTAEAMANSNYSEADFSDGSVSEDFLDALGAIDFGMSFRE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
ttgctggacgccaaaacgttcgacagcctgaagatcaccctggccaccggcgacgacatc
gccgagtggagccacggtgaagttaagaagccggagaccatcaactaccgtacgctcaag
cccgagcgcgacggcctgttcggtgagcagatcttcggccccacgcgcgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagaagtgcggggtt
gaggtcacgcgctcccgcgtccgccgtgagcgcatgggtcacatcgacctggccgcgccc
gtcacgcacatctggtacttcaagggagtcccctcccggctgggctacgtgctcaacctc
gcgcccaaggacctggagaaggtcatctacttcgccgcctacatgatcaccgaggtcgac
gaaaagggccgccacgaggatctggccgaactgcgcgccgaacttgaagtgcaaaagaag
cagatggagaacaaccgcgacgccaccatcaacgacttcgcggagcagctcgagtccgac
gtggccgccctggagaaggacggtgcctcacaggccgagcgcgagcgcgcccgcaagcag
ggcgaacgcgagatggccaagattcgccgccgcttcgacggcgacatcgacgggctcgag
gccgtgtgggagcgcttcaaggacctcaaggtcggcgacctcgagggcgacgagaggctt
taccgtgcgatggtggcccgctacggcacctacttcaagggtgacatgggggcggccgcc
atccagaagcgcctggagaccttcgacctggagggtgaggtcgccgcgctgcgccagacc
atcgcctcggattccggcccgcgcaaggcccgcgccatcaagcgcctgaaggtcattaac
gccttcgtcgcaaccgggaactcgccggcctcgatggtcctgacaaagatccccgtgatc
ccgccggacctgcgccccatggttcagctcgacggcggccgctttgcgacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacacccgactcaagcgcctgctggagctg
ggggcccccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtccgttgacgcc
ctcttcgacaacggtcgccgcggacgccccgtcgccggcccgggcaaccgcccgctgaag
tcgatctcggacatgctcaagggcaagcaggggcgtttccgtcagaacctgctgggcaag
cgcgtcgactactccggccgcagcgtcatcgtcgtcggcccgcagctgcagctgcaccag
tgcggtctgcccaagcagatggccctggagctcttcaagcccttcgtcatgaagcgcctg
gttgaaaagaactacgcgcagaacgtcaaggccgccaagcgcaaggtcgagcgccagcgc
cccgaggtgtgggacgtcctggacgacgttatccgcgaacacccggtgctgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggcgttcgaaccccagctgatcgagggtaag
gccatccagctgcaccccctggcctgcggcgcgttcaacgccgacttcgacggcgaccag
atggccgttcacctgccgctgggagcggaggcgcaggccgaggcccgcatcctcatgctg
tcgacgaacaacatcctcaagccctccgacggccgtcccgtggccatgccgtctcaggac
atgatcatcggtctgttccacctgacctcaacgcccgacccgtcggtgcccgtggaaacg
gacgaggacggcaatcccgtggttccgtacttctccagccaggccgaggcccagatggcg
ttcgacgccggtaacctggacctgaacgcgaccgcgcgcatccgtttcgccgacggcacc
gtgccgcccgaggggtgggaagcccccgagggctgggaggcgggcgacgacctgatcctc
gagaccagcctgggccgcgcgatcttcaacgagcagctgcccaccgactacccgttcgtg
aacgaggtcgtgggtaagaagcagctgggcaacatcgtgaacacgctgacgcagcgctac
ccgaacgtgctggtcgccgactgcctggacgccctcaagtccgctgggttccactggtcg
acctggtccggcatcacgattgcgttctccgacattcaggcctcgccgcgtaagcgcgag
atcctggcccgctacgaggccaaggcggcggagatcgtcgaacagttcgagacgggcatc
atcctggaggagacccgctacgaggagctcgtgaagctgtggctgcagtgcaccgaagag
gtcgccgacgatatgcgttcgaacttctccgagcgcaacaccgtgtatcgcatggtgaac
tcgggggctcgtggtaactggtcgcaggtccagcagatcgccggcatgcgtggcctggtg
tccgatccgaagcagaagctgatcgaacagccgatcaaggcgaactaccgcgagggcctg
accgtcctcgagtacttcatcgccacccacggcgcccgtaagggcctggtcgacacggct
cttcgtaccgccgagtcgggctacctgacgcgtcgcctggtcgacgtctcgcaggacgtc
atcgttcgagaggccgactgcggcacccgcgctggcctgaagatcgacatcgcccacagg
aacgacatgggtgagtgggaggcgtccgagacgatcgagacgaccgcctacgcccgtaat
ctcgcccgcgacgcggtgaacgaggcaggagaggtcgtcttgcccgcgggtaccgacctg
ggtgacgaccagctcgcgcagctcgttgaggcgggcgttgagcagatcgtgtgccgttcc
gtcctcacctgcgagtccgccgtcggcacgtgcgcggcctgctacggtcgctcgctggcc
accggcaagcaggtcgatatcggcgaggccgtcggcattatcgccgcccagtcgatcggc
gagcccggcacgcagctgacgatgcgtaccttccacaccggcggcgccgcctccgccgcg
gacatcacgcagggtcttcctcgcgttcaggagctcttcgaggcgcgcagcccgaaggtc
gaagcgaagatgaacgaggccgccggccgcgtccacatcaacgacgaggatccgagcgcc
cgcaaggtggtcatcacccgcgacgatggcaaggaggacctggttatcgaggtgtcgcgc
cgccagaagatgctggtgtccgagggccagcacatcaaggccggtacgccgctgaccgag
ggccagctggacccgaaggaaatcctgcgcatcatgggccgcaacgtgtcccagaagatg
ctcgttgacgaggtgcagaaggtgtaccgcgatcagggcgtgggtatccacgccaagcac
atcgaggtcatcgtgcgccagatgctgcgccgcgtcaccatcctggagcccggcgacacc
tcgttcatgcccggcgagctcgtcgaccgcatggcgtacctgacgcagaaccgtcgcgtc
gcggccgagggcggccagcccgcctcgggccgccagatgctgatgggcatcacgaaggcg
tccctggccacggattcgtggctgagcgccgcgtccttccaggagaccaccaaggttttg
acggaggccgcgatgaacggcaagtcggactccctggttggcctgaaggagaacgtgatc
ctcggtaagctcatcccggccggcacgggcctgtcgcgctacaacgacgtgatcgttgag
ccgacggctgaggccatggcgaactcgaactactcggaggctgactttagtgatggctcc
gtgtccgaggacttcctggacgcgctgggcgccatcgacttcggcatgagcttccgcgaa
tag
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integrated database retrieval system
