Schaalia meyeri: ADJ76_01880
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Entry
ADJ76_01880 CDS
T04027
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amy
Schaalia meyeri
Brite
KEGG Orthology (KO) [BR:
amy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amy03016
]
ADJ76_01880
Enzymes [BR:
amy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ADJ76_01880
Transfer RNA biogenesis [BR:
amy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ADJ76_01880
Prokaryotic type
ADJ76_01880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AKU64684
LinkDB
All DBs
Position
423208..424275
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AA seq
355 aa
AA seq
DB search
MARRPDNPRPGLLIIDKPQGLTSHDVVSRVRRLAHTRKVGHGGTLDPMATGVLVIGIGKA
TKLLTWVSGHSKEYRATIRFGISTNTDDAEGEPTQTLGCVSLPADALERALASLRGDIMQ
VPSTVSAIKVQGKRAYALARAGQDVALAARPVHVSRLEVPAPPRPLTVTPDAASARLGGA
TRVGAVRVVDVDVEVECSSGTYVRALARDAGRALGVGAHLTVLRRTRVGGFSLARAMTLK
ELTEAVDRAEPQGASEGGPTLPLIPLGEAARSMFPSLFLSRAEANAFAHGQAPRRSHHEL
IQWGADVGLALLGAGSAPRDASAIDDTPIAAVDPGGNVLGLLRIDAARLRTVLVF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcccgataacccccgccccggcctgctcatcatcgacaagccgcagggg
ctcaccagccacgacgtggtctcgcgggtgcgacgcctggctcatacccgcaaggtcggc
cacggcggcacgctggatcctatggcgacgggagtcctggttatcggcatcggtaaagcc
acgaaactgctcacgtgggtgagcggtcactcgaaggagtaccgggcgacgatccgtttc
ggcatatcgacgaacacggacgacgccgagggagagcccacgcagacgcttgggtgcgtg
tccctgcctgccgacgccctggagagggcgctggcttccctgcgtggcgacatcatgcag
gtgccgtcgacggtatcggcgatcaaggtgcaggggaagagggcgtacgcgctggctcgc
gccggccaggacgttgccctggctgcccggcccgtgcacgtctcacgcctggaggttccc
gcgcccccgcgccccctgaccgtcacgcccgacgcggcctcggcccggctgggcggggcg
acgcgggtgggcgctgtgcgcgtcgttgatgtcgacgtcgaagttgaatgctcctcgggt
acctacgtgcgagccctggcccgcgacgctggtcgggccctcggcgtgggcgcccacctg
accgtgctgcgccgcacacgagtcggaggcttttcgctcgcgcgcgcgatgacgcttaag
gagctcacggaagcggtcgaccgggcagagcctcagggggcgtccgaaggcgggccgacc
ctgccgctgattccccttggtgaggccgccaggagcatgttcccatccctgttcctgagc
cgggccgaggccaacgctttcgcccacgggcaagcgcccaggcgatcacaccacgaactg
atacagtggggagccgacgtcgggctcgcgctcctcggcgctggatccgccccccgcgat
gcttccgcgatcgacgacaccccgatcgcagccgtcgaccccggcggaaacgtcctcggc
ctgcttcgtatcgacgcggcgcgtctgcgaaccgtcctggttttctag
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