KEGG   Schaalia meyeri: ADJ76_01920
Entry
ADJ76_01920       CDS       T04027                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
amy  Schaalia meyeri
Pathway
amy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ADJ76_01920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amy03019]
    ADJ76_01920
Messenger RNA biogenesis [BR:amy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ADJ76_01920
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF5548
Other DBs
NCBI-ProteinID: AKU65860
UniProt: A0AAP9Y6N6
LinkDB
Position
432249..433943
AA seq 564 aa
MKSLYENLSEPAPLEDDALRVIPLGGLGEIGRNMNVLEYRGKLLVVDCGVLFPEETQPGV
DLILPDFSWIEDRMDDVVGLVLTHGHEDHIGAVPYLLKLRGDIPIYGSDLTLAFVAPKLR
EHRLSDPGLTIVAEGERLTVGPFDLEFVSVTHSIPDALAVFVRTGAGNVLITGDFKMDQL
PLDRRLTDLRAFARMGEEGVDLFMVDSTNALVPGFITPEREIGPVLDQVFGEADGGQIVV
ASFASHVHRVQQVINAAAHHGRRVAFVGRSMERNMRIAEEKGYLSIPEGIIVDLKEIGDL
PPSQRVYMATGSQGEPMAALSRMSVGSHRTVRIEPGDMIVLASSLIPGNENSVYRVINDL
TRLGARVVSKENAKVHVSGHASAGELIYCYNIIQPKNVMPIHGEVRHLVGNGQLAVKTGI
SPRNVVLAEDGVTVDLKDGTARVSGIVPCEYVYVDGRSIGEISEDELETRRTLGSEGFIS
IFAVVEHDSGTVLAGPEIRAIGMAEDDDVFEEILPDVTKALTEAAAPGGQDPYVLQQAMR
RVIGRWVARRLRRRPMIVPVVTEQ
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgaagtctttgtacgagaacctcagcgagcccgcgcccctggaagatgacgcactgcga
gtgataccgctgggaggtctcggcgagatagggcgcaacatgaacgtcctcgagtaccgg
ggcaagctcttggtcgtggactgtggcgttctcttccccgaggaaacccagccgggcgtg
gacctgatcctgcccgacttttcctggatcgaggaccgcatggacgacgtcgtcggcctg
gttttaacgcacggccacgaggatcacatcggcgccgtgccctacttgctcaagctgcgc
ggcgacatccctatctacggctcggacctgacgctcgcgttcgtggcccccaagctgcgt
gaacaccgcctgagcgaccccggcctcaccatcgtcgcggagggcgaacgcctgaccgtg
gggcccttcgaccttgagtttgtctccgtcacgcactcgatccccgacgcgctcgccgtg
ttcgtgcgtaccggggccggtaacgtgctgatcacgggcgactttaagatggaccagctg
ccgctggaccgccgtctgaccgacctgcgtgccttcgcccgtatgggagaggagggcgtt
gacctgttcatggttgactccacaaacgccctggttcccggtttcattacgcccgaacgc
gagattggcccggttctcgatcaggtgtttggcgaggccgacggcggtcagatcgtcgtg
gcttccttcgcctcccacgtgcaccgtgtccagcaggtcatcaacgcagccgcccatcac
gggcgccgcgtcgcgttcgtggggcgctcgatggagcgcaacatgcgcatcgccgaggaa
aagggctacctgtcgatccccgagggcatcatcgtggacctgaaggagatcggtgatctg
ccgccctcgcagcgcgtgtacatggcgacggggtcgcagggtgagcccatggccgccctc
tcgcgcatgtcggtgggctcccaccgcacggttcgaatcgagccaggcgacatgatcgtg
ctcgcttcgtcgttgatcccgggcaatgagaactccgtgtaccgcgtcatcaacgacctg
acgcggctgggggcgcgcgtcgtgtccaaggaaaacgcgaaggttcacgtctccggtcac
gcgagcgccggggaactcatttactgctacaacatcatccagccgaagaacgtcatgccc
attcacggggaggttcgccacctggtcggcaacggtcagctggccgtcaagacgggcatc
agcccgcgcaacgtggtcctggccgaggacggcgtgaccgttgatttaaaggacggcacg
gctcgcgtgtcgggcatcgttccctgcgagtacgtgtacgtggatggccgctcgatcggc
gagatttccgaggatgagctggaaacccgccgcaccctggggtcggagggcttcatctcg
attttcgcggttgtcgagcacgactctgggactgtgctggcgggccccgagattcgcgcg
atcggtatggccgaagacgatgacgtgttcgaggagatcctgcccgacgtcaccaaggcc
ctcacagaagcggcggctcccggcgggcaggacccgtacgtcctgcagcaggcgatgcgt
cgcgtgatcggtcgctgggttgcgcggcgcctgcgtcgtcggcctatgatcgttccggtg
gttaccgagcagtag

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