Schaalia meyeri: ADJ76_02555
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Entry
ADJ76_02555 CDS
T04027
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amy
Schaalia meyeri
Brite
KEGG Orthology (KO) [BR:
amy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amy03016
]
ADJ76_02555
Enzymes [BR:
amy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ADJ76_02555
Transfer RNA biogenesis [BR:
amy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ADJ76_02555
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKU64796
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Position
complement(582759..584003)
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AA seq
414 aa
AA seq
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MLINNGGGLPRGDTDDPKLIAQPRGGIPAVIDTQHDLERAVRNLKTGTAPVALDVERAQG
FRYGSDPYLVQIRREDVGTFLIDTHALPDLSALQPGLEDVWLLHDCLQDLPNLRQVGLRP
SSLFDTEIAARLVGLQRFGLAAVAEQVLGLGLVKDHQASDWSVRPLPKEWLRYAALDVEL
LTELYYRLSKKLDQMGRWEWAQQEFSYSLSVPPAATKPDRWRSVPGSGKIRSRRGLGVLK
ALWETRESIARRIDLSPGRLVRNGALIRAAAAPPKNRRALMSINEFRSPVAKQYMNEWMH
ALASVNAMAEDELPPKNRPVQPGSIPEPRQWNRIDESAAARLGTVRAAVASVASRLDLAP
EVVLAPQVQRYLAWAPLDPSRPSGDEVEERMVFRGARDWQIDLTLDPICDALGV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgttgatcaacaacggcggtggcttgccgcgcggcgatacggatgacccgaagctcatc
gcgcagccgcgcggggggattcccgccgtcattgacacgcagcacgaccttgagcgtgcc
gtgcgcaacctgaaaacgggcacggccccggtcgccctggatgtggagcgcgcccagggc
tttcgctacggctctgacccctacctggtgcagattcgacgcgaggatgttgggactttc
ctgatcgacacccacgcgctgcccgatctgtccgcgttgcagcccgggctggaggacgtg
tggctcctccacgattgtctgcaggacctgccgaatcttcgtcaggttggtttgcgtccg
tcctcgctgttcgacaccgaaatcgcggcgcgcctggttggcttgcagcgcttcggcctg
gcggcggtcgctgagcaggtgctgggcctgggcctcgtcaaggaccaccaggcctcggat
tggtcggttcgtcctctccccaaagaatggctacgctacgccgcgctggacgttgagctc
ctcacggagctgtactaccgcctgtcaaagaagctcgatcagatgggtcggtgggagtgg
gctcaacaggagttctcgtactcgctgtcggttccgcccgctgccacgaaaccggatcgg
tggagatccgtaccaggatccggaaaaattcgcagccgccgaggcctgggcgtgctcaag
gcactgtgggagacacgcgagtcgattgcgcgccgcatcgacctgtcccccggtcgcctc
gtacgtaacggggcactgatacgtgcagcggctgcgccacccaagaacaggcgcgcgctc
atgagcatcaacgagttccgatcccccgttgccaagcagtatatgaacgagtggatgcac
gccctcgccagcgtcaacgcaatggcagaagacgagcttccacccaagaacaggcccgtt
caaccgggttcgattccggagccacgccagtggaatcgcatcgacgaatccgctgccgcc
cggctgggaaccgtacgcgccgcggtcgcgtcggtcgcctcgaggctcgacttggccccc
gaagttgtgctggcaccgcaggtacaacgctacctggcttgggcccccctggatccctcg
cgcccgtccggtgacgaggtggaggaacgcatggtgttccggggggccagggactggcag
atcgacctgacgctcgaccccatctgcgacgcgctcggcgtctga
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