Schaalia meyeri: ADJ76_03985
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Entry
ADJ76_03985 CDS
T04027
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
amy
Schaalia meyeri
Pathway
amy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ADJ76_03985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amy03019
]
ADJ76_03985
03009 Ribosome biogenesis [BR:
amy03009
]
ADJ76_03985
Messenger RNA biogenesis [BR:
amy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADJ76_03985
Ribosome biogenesis [BR:
amy03009
]
Eukaryotic type
Pre-60S particles
RNases
ADJ76_03985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
MOR2-PAG1_C
Motif
Other DBs
NCBI-ProteinID:
AKU65911
LinkDB
All DBs
Position
complement(898382..898978)
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AA seq
198 aa
AA seq
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MTGLDVARDALIEVSVVVTDGDLMIVDPGIDVLITPPASALDGMSDFVRNMHTASGLLDE
LATSGVSMEEATDRVLSYIKRFVPQQGKALLAGNSVGTDKMFLEANMPSVVEHLHYRLVD
VSSVKELAKRWYRAAFAESPVKNGGHRALADILESIQELEYYRRVLFPAQPVTTEKARAV
AREVVALGIASLGEDTQA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcctggacgtcgctcgcgacgccctcatcgaagtgtccgtcgtggtcaccgac
ggcgatctgatgattgtggaccccggaattgacgtgctcatcacgccgcccgcgtccgca
ctggatggcatgagcgacttcgtgcgcaacatgcacaccgcctccgggctgctcgatgag
ctggccacctccggggtgtccatggaggaagcgaccgatcgggtcctgtcctacatcaag
cgtttcgtgccgcagcaggggaaagcactcttggcgggcaattccgtgggcaccgacaag
atgttcctcgaggcgaacatgccctccgtggttgaacacctgcactatcgcttggtcgac
gtgtcttccgttaaagagctggctaaacggtggtaccgtgcggctttcgccgagtcgccc
gtcaagaatgggggacaccgcgcgctggcggatatcctcgagtccatccaggagctggaa
tactaccgtcgcgtgctcttcccggcgcagcccgtcaccaccgagaaagcacgtgcggtc
gcccgtgaggttgtcgcgctgggcatcgcatcgcttggcgaggacacccaggcctag
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