Schaalia meyeri: ADJ76_05390
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Entry
ADJ76_05390 CDS
T04027
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amy
Schaalia meyeri
Pathway
amy03420
Nucleotide excision repair
amy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ADJ76_05390
03430 Mismatch repair
ADJ76_05390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amy03400
]
ADJ76_05390
Enzymes [BR:
amy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADJ76_05390
DNA repair and recombination proteins [BR:
amy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADJ76_05390
MMR (mismatch excision repair)
Other MMR factors
ADJ76_05390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKU65955
LinkDB
All DBs
Position
complement(1223221..1226658)
Genome browser
AA seq
1145 aa
AA seq
DB search
MLLSATQIQRIVDESKNPTPEQVRVVEAPRRPLLVVAGAGSGKTETMSMRVLWLLANHPD
LSPSSILGLTFTRKAAGELGDRLRARIRLLAQAMPQLRRRLDEEPVSLTYNSFAERIVSE
HGMRIGIDPDFSMLSEAGAMDVMLQIVEAWPTDLDDSLTPLGAVGHILHLAGEIAEHGYT
VGSARSALEEFGRELEQVGQTNDDARRLLRANRRRIAFLGPIEAYQQRKRDMGFLDFSDQ
LVLATRIVREAPAVRSALRDEFRAVLLDEFQDTSVIQMDLLSMLFGDHAVTAVGDPNQAI
YGWRGASASSLESFLDRFCCAQMEAGLTLTLSTAWRNDSSILDAANRVAAPLREVASYQE
GKKALNARSPVLVPRPGAGEGHVEVAYAPFYEDALGVVVDFVQRVRSQASEEGKRRTVAV
LCRRRKDFAFVDAALREAGVPTQIVGLGGLLDQGAVQDVRASLELAYDVGASPWLARLLA
GIDLGTADLIALGDWARALARREGASPHQAVLLDAVDAPPEAGWHADGRPAISDEAVRRV
RLLGERLRAVRAGVGRGVVEQVERAILIMGTLDDVIADPLSMGGRAALDEFVSVAAAYER
DTPGASLASFLAYLRMAEDREDGLEAPLGEPDPRAVQIMTVHASKGLEWDCVVVFGMSDG
VFPSHGKRNTVSWLDEPPTDTAWLTDSSALPHPLRGDRADLPPFDLDVEGEPKPSAAYSK
WIKEEYGRALGVHAEREERRLAYVAMTRARSAQLLVGSWLYRTGSSVKQPSRYLMETRDQ
LFGDSPDPADGSLAGVSDRSVWAGGHWRGTGVAPVSGAGACCLAPRPGEADLAALVSGTS
SATFPQEPGPSRRRVAGAAAAVEGQIRALVGEGDVYQALEQLGDDPAVRDTVALIEEHRR
GQQTPVVDLWAERVPATSVSALLQDSQEFARDMRRPMPSKPSSLSALGTVFHAWAERELH
IAAQVAPDADPSMASPGVDGALSGGEGGGDEALLTEAERGLLERLRANFRTFVGTELADY
RAIAIEEAFSVEVGGVSVQGRIDAVFERTGGDGPRYLVVDWKSGQPVTASTKPDKIAYFV
TQLRLYRRAWASRVGVEPGEVGAMVAFLAGPSHFALEDLERILGSAGMPLDDAVRGALGE
GRSRA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgagcgcaacccagatccaaaggatcgtcgacgagtcgaagaacccgacgccg
gagcaggtgcgcgtggttgaggccccgcgccggcccctcctggtcgtcgcgggtgccggg
tcgggaaagaccgaaaccatgtcgatgagggtgctgtggctcctggccaatcacccggac
ctgagcccctcgtcgatcctgggcctgaccttcacccgcaaggccgccggcgagctgggg
gaccgcctgcgggcgcgcattcgcctgctggcacaggcgatgccgcagctgaggcgccgc
ctggacgaggaacccgtgtccctgacctataactctttcgcggagcgcatcgtctccgaa
cacggaatgcgcatcggcatcgacccggacttttccatgctctccgaggccggtgccatg
gacgtcatgctccagatcgttgaggcgtggcccaccgacctggacgactcactcacgccg
ctgggtgcggtcggacacatccttcacctggctggggagatcgccgagcacgggtacacg
gtagggagcgcccgctccgcgctggaggagttcgggcgggagctggagcaggtgggccag
accaacgatgacgcgcgccgtctgctgcgcgcgaatcgccgccgcatcgcgttcctcggc
cccatcgaggcgtatcagcagcgcaagcgagacatggggttcctggacttttccgaccag
ctggtcctcgcgacgcgcatcgtgcgcgaggccccggcggtgcgcagcgcactgcgtgac
gagttccgcgccgtcctgttggacgagtttcaggacacctccgtcattcagatggatctg
ttgtccatgctgttcggcgatcacgcggtcaccgcggtgggggacccgaatcaggcgatc
tacgggtggaggggggcctcggcctcgtccctggagtcctttctcgatcgattctgctgc
gcccaaatggaggcggggctaaccctcactctgtcgaccgcgtggcgcaacgattcttcg
atcctggacgcggcgaaccgagtggcggcgcccctgcgcgaggtcgcctcttaccaggag
gggaaaaaggcgctcaatgcgcggtcgccggtgctggtgccgcgaccgggcgcgggcgag
gggcacgtcgaggtcgcctacgcgcccttttacgaggatgctctgggggtggtcgtcgac
tttgtccagcgcgtccgctcccaggcgtcggaggaggggaagcgtcgcacggtggccgtg
ctgtgtcggcgccgcaaggattttgcattcgtggacgccgcgctgcgcgaggcgggcgtc
ccgactcagatcgtcggcctgggagggctgcttgaccagggggcagtccaggacgttcgg
gcttccttggagttggcgtacgacgtgggcgcttccccgtggctcgcccgcctgctggcg
ggcatcgacctggggacggcggaccttattgccctgggggactgggcgcgcgccctggcg
cgccgcgagggggccagcccccaccaggcggtgctcctcgacgcggtggatgctccgccg
gaggcggggtggcacgcggacggtcgccccgcgatcagcgacgaggccgtgcgacgcgtg
cggttattgggcgagcgattgcgcgcggtgcgcgcgggggtcgggcgaggcgtcgtggag
caggtcgaaagagcgatcctcatcatggggaccttggacgacgtgatcgcggatccgctg
tcgatgggcgggcgcgccgcgctggatgagttcgtttcggtggccgccgcctacgagagg
gacacgccgggcgcgtccctggcctcattcctggcgtacctgcgcatggcggaggaccgc
gaggacgggctcgaggcgcccctgggcgagccggatccgcgcgccgtgcagatcatgacg
gtgcacgcatccaagggactcgagtgggactgcgtcgtcgtgttcggcatgagcgacggc
gtatttccctcgcacggaaagaggaataccgtgtcgtggctggacgagccgccgaccgac
acggcgtggctgacggattccagcgcgctgcctcacccgctgcgcggagaccgcgcggac
ctgcctcccttcgacctggacgtggagggcgaaccgaagccgtcagctgcgtattcgaag
tggatcaaagaggagtacgggcgcgccctcggcgttcacgcggaacgggaggaacgccgc
ttggcgtacgtggccatgacgcgggcgcgcagcgcccagctgctggtgggctcctggctg
tatcgcacgggttcgtcggtgaagcagccgtcgcgctaccttatggagacccgcgaccag
ctgttcggcgattccccggacccggcggatggctccctcgcgggcgtgagcgaccgcagc
gtgtgggccggggggcactggcgcggcacgggggttgcgcctgtgtccggcgcaggggca
tgctgccttgccccgaggccgggcgaggcggacctggcggcgttggtcagcggcacttcc
tcggcgactttcccgcaggagcccgggccgtcgcgtcggcgggttgcgggtgcggcggcg
gccgtggaggggcagattcgcgccttggtgggcgagggggacgtgtatcaggcattggag
cagctgggcgatgaccccgccgtgagggatacggtcgccctgatcgaggagcatcgccgg
ggccaacagacgccggtcgtggacctgtgggccgagcgcgttccggccacctccgtgtct
gcgctgctgcaggattcacaggagttcgcccgggacatgcgtcggccgatgccgagcaaa
cccagttcgttgtccgcgctcggcacggtgtttcacgcgtgggcggagcgggaacttcac
atcgccgcccaggtcgcccccgacgccgatccctccatggcctcgccgggcgtggacggt
gcgctgtccggcggcgagggcgggggcgacgaggccctgctgacggaggcggagcgcggg
ctgctcgagaggctgcgggctaacttccgcacgttcgtaggcacggagctggccgactat
cgggcgattgctatcgaggaggccttttccgtggaggtaggcggcgtgtccgtccagggg
cgcatcgacgcggtgtttgagcgcacgggcggcgacgggccgcgctacctggtggtcgac
tggaagagcggccagccggtcacggccagcacgaagccggacaagatcgcctactttgtg
acccagctgcgcctgtaccggcgcgcgtgggcatcccgcgtcggcgtcgaaccgggcgag
gtgggtgcgatggtcgccttcctggccggtccctcgcacttcgcgttagaggacctggag
cggattctcggcagcgctggcatgcccctggacgacgcggtgcgaggcgcgctgggggag
gggcgctcccgcgcgtaa
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