Schaalia meyeri: ADJ76_06815
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Entry
ADJ76_06815 CDS
T04027
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amy
Schaalia meyeri
Brite
KEGG Orthology (KO) [BR:
amy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amy03032
]
ADJ76_06815
03400 DNA repair and recombination proteins [BR:
amy03400
]
ADJ76_06815
Enzymes [BR:
amy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ADJ76_06815
DNA replication proteins [BR:
amy03032
]
Prokaryotic type
DNA Topoisomerases
ADJ76_06815
DNA repair and recombination proteins [BR:
amy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ADJ76_06815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKU65492
LinkDB
All DBs
Position
complement(1563743..1566478)
Genome browser
AA seq
911 aa
AA seq
DB search
MSATKLVIVESPAKAATIKGYLGPDYHVTASIGHIRDLPQPSELPKDMKKGPFGRFAVNV
DDGFTPYYVVNPDKKKKVTELRKLLKESDELFLATDEDREGEAIAWHLLQVLKPKVPVRR
MVFHEITKEAIQRALDNTRDLDTALVDAQETRRILDRLYGYEVSPLLWRKIRPSLSAGRV
QSVATRLVVARERDRMAHVSAEYWSIDTSFTCAGQAFGARVTSVDGAAIATGSDFSEKGE
LSAKAVKSGILHLDEATARSYAQALTDAPGSVIDSVTRKPYRRRPAAPFTTSTLQQEASR
KLHWNASSTMRTAQSLYESGYITYMRTDSTALSGQAIHAARQQATQLYGADAVAEAPRTY
GAASKGAQEAHEAIRPAGDHFRTPGEVASSLSKQQLALYDLIWKRTVASQMADALGYTAT
IRVLTGIDVDGKRHDVLSSASGTVITTPGFRLAYEEGRDRGRYEAEKNDAEKTLPDVAEG
DAASLTRATPDGHETQPPGRYTEATLVKTMEELGIGRPSTYAATIQTIGDRGYVTHRGQY
LVPTWLAFSVTRLLEENLANLVDYDFTASMEGDLDRIAAGEENGTEFLSGFFFGPDGSGE
VGGLRHDVASLGDDIDARAVNSIDLGRGVTLRVGRYGPYMEKADGTRANVPPEVAPDELG
DQLVDQLFSRAADDGRELGVDPDTGHTIIVKDGRYGPYVTEVLPEPEGDDGAKAKKSAAK
PRTASLFKTMDISTVTLSDALQLLSLPREVGVDPASGEAITAQNGRYGPYLKKGTDSRTL
SSEDQLLSITLEQALAIYAQPKTRGRTAARPPLREFGEDPISGKKVTVKDGRFGPYVTDG
ETNVTVPRAETVEDLTAERAYELLADKRAKGPAPKRARKTVAKKTTTKKKATVKKPAAKK
TSAKKTATKER
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgacgaagctcgtgatcgtggagtctcctgcgaaggcggccaccatcaaggga
tacctgggtcccgactaccatgtgaccgcgtcgatcggccacatccgtgacctcccccag
ccctccgagctgcccaaggacatgaagaaagggccctttggtcgtttcgccgtcaatgtg
gatgacggattcacgccgtactacgtggtgaacccggataagaaaaagaaggtcaccgaa
ctcaggaagctcctgaaagagtccgacgagctcttcctggccaccgatgaggaccgggag
ggcgaggccatcgcgtggcacctcctacaggtcctcaagccgaaggtgcccgtgcgccgc
atggtctttcacgagatcacgaaggaagccattcagcgggccctcgacaacacccgcgac
ctggatacggccctggtggacgcccaagagacgcgccgcatcctcgaccgcctctacggc
tacgaggtatcccccctgctgtggcgcaagattcgcccgtccctgtcggccggccgcgtg
cagtcggtggccaccaggctcgtcgtcgccagggaacgcgaccggatggcgcacgtaagc
gccgaatactggtcgatcgacacgtccttcacgtgcgcgggtcaggccttcggcgcgcgc
gtcacctccgtggacggggcagcgatcgcgaccggctcggacttcagcgagaagggcgag
ctgagcgcgaaggccgtcaagtccggcatcctccacctggacgaggccacggcccgctcc
tacgcgcaggcactgaccgatgccccgggctcggtcatcgactccgtgacccgcaagccg
taccgtcgccgcccggccgcccccttcacgacgtcaaccctgcagcaggaggcctcgcgc
aaactgcactggaacgcgtcatcgaccatgcgtaccgcgcaatccctgtacgagtccggc
tacatcacgtacatgcgcacggactccaccgcgctgtcggggcaggcgatccacgccgcg
cgccagcaggccacccagctctacggcgcggatgccgtggcggaggccccccgcacgtac
ggggcggcgtcgaagggcgcgcaggaggcccacgaagcgatccggcccgccggggatcac
tttcgcacgccgggcgaggtggcctcgtccctgtcgaagcagcagctcgccctgtacgac
ctgatctggaagcgtacggtcgcctcgcagatggccgacgcgctggggtacacggcgacc
atccgcgtgctcacgggcatcgacgtggacggcaagcgtcacgacgtgctctcctccgcc
tcaggcacggtcatcacgactcccggtttccgcctggcctacgaggaggggcgtgaccgg
gggcgctacgaggcggaaaagaacgacgcggagaagacgctgccggatgtcgccgagggg
gacgccgcttccctgacacgggcgacgcccgacgggcacgagacgcagcctccggggcgc
tacacggaggccacgctggtcaagaccatggaggagctgggcatcggccgcccctccacg
tacgcggccaccatccagacgatcggggaccgcggatacgtgacgcaccgcggccagtac
ctggtccccacgtggctggcgttctccgtgacgcgcctgctggaagagaacctggcgaac
ctggtggactacgactttacggcgtccatggagggcgacctggaccgcatcgccgcgggc
gaagagaacggcacggagttcctttccggtttcttctttggccccgacggatcgggcgag
gtgggcggcctgcgacacgacgtggcctccctgggggacgacatcgacgctcgcgccgtg
aactcgatcgacttggggcgtggggtgaccctgcgcgtgggccgctacgggccgtacatg
gaaaaggccgacggcacccgcgcgaacgtgccgccggaggtcgcgcccgacgagctgggc
gaccagctggtggaccagctctttagccgcgccgccgacgacggccgcgagctgggcgtc
gacccggacaccggccacacgatcatcgtcaaggacgggcgatacggcccgtacgtgacc
gaggtccttcccgagcccgagggcgatgacggtgcgaaggccaagaagagcgccgccaag
cccaggaccgcctctctgttcaagaccatggacatctccacggtgacgctgtcagacgcg
ctccagctgctgtccctgcctcgcgaggtgggggtggacccggcctcgggcgaggcgatc
accgcccagaacggccgctacgggccctacctgaagaaggggacggactctcgcaccctg
tccagcgaggaccagcttttgtcgatcacgctggagcaggccctggctatctacgcccag
cccaagacccggggccgcaccgccgcccggccgccgctgcgcgagttcggagaggatccg
atatccggtaagaaggtgaccgtcaaggacgggcgcttcggcccctacgtgacggacgga
gagacgaacgtgacggtccctcgggccgagacggtcgaggacctgaccgccgagcgcgcc
tatgagctgctggccgacaagcgcgccaagggccccgccccgaagcgcgcgcgcaagacc
gtggcaaagaagacaacgacgaagaagaaggcgacggtgaagaaacccgccgcgaagaag
acgagcgccaagaagacggcgacgaaggaacgataa
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