Amycolatopsis sp. BJA-103: BKN51_04060
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Entry
BKN51_04060 CDS
T05296
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb00470
D-Amino acid metabolism
amyb00550
Peptidoglycan biosynthesis
amyb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BKN51_04060 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKN51_04060 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amyb01011
]
BKN51_04060 (murD)
Enzymes [BR:
amyb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BKN51_04060 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
amyb01011
]
Precursor biosynthesis
Amino acid ligase
BKN51_04060 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
TrkA_N
ADH_zinc_N
Shikimate_DH
NAD_binding_7
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
AUI57474
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All DBs
Position
891621..893024
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AA seq
467 aa
AA seq
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MSLDGRHVLVAGAGVTGKSIVPVLRELGARITVTDGNAERLAELEGLGAELVPGLTEPPE
GVELVVTSPGWKPTSPLLVAAAGAGIEVIGDVELAWRVGQLRDKPPVWLAITGTNGKTTT
VGMLESILRSAGVDAVACGNVGFAVLDAVRAGHEVLAVELSSFQLHWSSTLAPLASVVLN
LAEDHLDWHGSMEEYAAAKGRVHTHSRNVVHNLHEEWSIRLADEHSPADARRVAFGMDTP
RPGELGIVEDLLVDRAFVAEPATSADELGTLADVRPAGPHNVSNALAAAALARAYGVSGE
DVAKGLREYRPAPHRAEEIGEIDGVRYINDSKATNPHAASGSLRAHLNVVWIAGGQLKGA
SVDELVGSIAGRLRGVVLFGVDSPVIAAAVARHAPDVPVNSLPSGDDDTMTAAVKAARAL
ARPGDVVLLAPAAASLDMYSSYGARGDAFASAVRVLRDGAGETSDGG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcttgatggccgccacgtcctcgtcgccggtgccggggtcaccggcaagtcgatc
gtccccgtcctgagggagctgggcgcgcggatcaccgtcaccgacggcaacgccgaacgg
ctggcggagctcgaaggactcggcgccgagctggtgcccggcctgacggagccgcccgaa
ggtgtcgagctggtcgtgaccagccctggctggaagccgacgtcgccgttgctggtggcg
gcggccggggcggggatcgaagtgatcggcgacgtcgagctggcgtggcgcgtcgggcaa
ctgcgcgacaagccgccggtgtggctcgcgatcaccggcaccaacggcaagaccaccacg
gtcgggatgctggagtcgatcctgcgttccgccggggtcgacgccgtggcctgcgggaac
gtcggcttcgcggtactcgacgcggtgcgcgccgggcacgaggtgctcgccgtggagctg
tcgagcttccaactgcactggtcgtccacactggccccgctcgcctcggtggtgctgaac
ctggccgaggaccacctcgactggcacggctcgatggaggagtacgcggccgcgaagggg
cgggtccacacccactcccggaacgtggtgcacaacctccacgaggaatggtccatccgg
ctcgcggacgagcactcgcccgcggacgcccgccgggtcgccttcggcatggacaccccg
cggccgggtgaactcgggatcgtggaagacctgctggtcgaccgcgctttcgtcgccgaa
ccggcgaccagcgccgacgaactcggcaccctggccgacgtccgtcccgccggtccgcac
aacgtctccaacgcgctcgccgcggccgcgctggcccgcgcgtacggcgtcagcggcgag
gacgtcgccaagggcctgcgcgagtaccgccccgccccgcaccgcgccgaggagatcggc
gagatcgacggcgtccggtacatcaacgactccaaggcgaccaacccgcacgcggcgagt
ggatcactgcgcgcgcatctgaacgtcgtctggatcgccggtggccagctcaagggcgct
tccgtggacgagctcgtcggctcgatcgccggcaggctccgcggggtcgtgctgttcggc
gtggattcacccgtgatcgccgccgctgttgcgcgacacgcgccggatgtcccggtcaac
agcctcccttcgggtgacgatgacaccatgactgcggcggtgaaggcggcccgcgccctg
gcgcgccctggagatgtggtgctgctggcccccgccgcggcgtcgttggacatgtactcg
agctacggcgcacgcggcgacgcgttcgcgagcgcggtccgtgtcctgcgcgacggtgcg
ggggagaccagtgacggcggttga
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