Amycolatopsis sp. BJA-103: BKN51_09420
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Entry
BKN51_09420 CDS
T05296
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb03030
DNA replication
amyb03430
Mismatch repair
amyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKN51_09420
03430 Mismatch repair
BKN51_09420
03440 Homologous recombination
BKN51_09420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyb03032
]
BKN51_09420
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_09420
Enzymes [BR:
amyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKN51_09420
DNA replication proteins [BR:
amyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKN51_09420
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKN51_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
DUF533
TerB
DSBA
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AUI58415
LinkDB
All DBs
Position
2302944..2304194
Genome browser
AA seq
416 aa
AA seq
DB search
MRSLRGFAVVDTETTGILPSFRHRVAEIAVVHVDLTGEITHQWSTLVNPGRDLGPQAIHG
IRAAEVRCAPKFEHFVGDLLELFRGRVLVAHNLPFDAMHLHAEFARLAVDLSRYLSGGVC
TMRLAGAVFPGMRRSLVECCKAVGVDGVRFHTALGDALGAARLFSRLVEGAREIASSRLQ
DLPNVHWDLPAMPHGLVKPVRRQAGASAEPHFLARLVDRVPREGEPAVDAYLAVLDGALL
DRQISVSEADALIEAAHDFGLHKAEVIDVHHAYLRDLARAAWADGHVSVEERRDLAAVAD
LLGLDVKEVDLVLREEQATPMQRPQVHVAEVSIGGLVLRPGDRIVLTGTMRRQRSDLKAE
AESLGLQVISSVSKKTRVVAAADPDSLSGKAKDARLLGVPVVAEDAFVRALEAMKE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtcgcttcgggggtttgctgtcgtcgataccgagacgacggggattctgcccagc
ttccgtcatcgcgtggccgagatcgcggtcgtccatgtcgatctcacgggggagatcacc
caccagtggtcgaccctggtgaatccgggccgtgatctcggcccgcaggccatccacggt
atccgtgccgccgaggtgcgctgtgctccgaagttcgagcattttgtcggcgacctgctt
gaacttttccgtggtcgtgtcttggtcgcgcacaatctgccgtttgatgctatgcacctg
cacgccgaatttgcgcgtctggctgtggatctgtcccggtacctgtccggcggtgtgtgc
acgatgaggctcgcaggcgccgttttccctggaatgcgacggtcgcttgtcgagtgctgt
aaggcggtcggcgtcgatggcgtgcgattccataccgcgctcggggacgccctcggcgcc
gcccgcttgttcagtcggctggtggaaggtgcccgagagatagcttcgtctcggctgcag
gacctaccgaacgtgcattgggatctacccgccatgccacacggcctggtcaagcctgta
cgtcggcaggcgggcgctagcgccgagccgcactttctcgcccggctggtggaccgcgta
ccgcgggaaggcgagcccgcggtggatgcctaccttgccgtgctggacggagccttgctc
gaccggcagatctcggtatcggaggccgacgcgctgatcgaagccgcccatgacttcggc
ttacacaaggcggaagtcatcgacgtgcaccatgcctacctgcgtgatctcgcgcgagct
gcctgggccgatgggcacgtgtccgtagaagagcgacgagacctggcagcggtagccgac
cttctcggtctcgatgtcaaggaggtcgatctcgttctccgagaagagcaggccacgcct
atgcagcggcctcaggtccacgtcgcggaggtcagcatcggggggcttgtcctgcgccct
ggtgatcggatcgtcctgacgggaaccatgcgacgtcagcgcagcgacctcaaagcagaa
gcggaatccctcggcctccaggtgatcagctcggtgagcaagaagaccagagtcgttgcc
gccgcggatcccgattcgttgtccggcaaggcgaaagatgcacgtcttctgggagttccc
gtcgtggccgaagatgctttcgtccgcgcccttgaagcaatgaaggagtaa
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