Amycolatopsis sp. BJA-103: BKN51_18180
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Entry
BKN51_18180 CDS
T05296
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BKN51_18180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
amyb03011
]
BKN51_18180
Ribosome [BR:
amyb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BKN51_18180
Bacteria
BKN51_18180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
DUF2110
SOGA1-2-like_CC
DUF4054
Motif
Other DBs
NCBI-ProteinID:
AUI59939
LinkDB
All DBs
Position
complement(4278962..4280467)
Genome browser
AA seq
501 aa
AA seq
DB search
MTTDTATAPTAPTGAPQVAINDIGSEEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLL
DIGYKTEGVIPSRELSIKHDVDPAEVVTVGDEVEALVLQKEDKEGRLILSKKRAQYERAW
GTIEELKEKDEPVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKI
IELDKNRNNVVLSRRAYLEQTQSEVRSEFLNALAKGQVRKGVVSSIVNFGAFVDLGGVDG
LVHVSELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAI
GQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVNGDVMVKVIDIDL
ERRRISLSLKQANEGVTPETEFDPTQYGMAAEYDTEGNYIYPEGFDPDTQEWQDGFDKQR
EEWERQYAEAHTRYEAHMKQVVKAAEADAEAAADAATGVTSSSSDSGEQSYTSAPAEAKS
GGTLASDEQLAALREKLSGGA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacaccgccaccgccccgaccgcccccactggggccccgcaggtcgctatc
aacgacatcgggtcggaggaagatttcctcgcagcgatcgacaagacgatcaagtacttc
aacgatggcgacatcgtcgaaggaaccatcgtcaaggttgaccgtgacgaggtcctgctc
gacatcggctacaagaccgagggtgtcatcccctcgcgtgagctctccatcaagcacgat
gtcgacccggctgaggttgtcaccgtcggcgatgaggtcgaagccctggtcctccagaag
gaggacaaggaaggccgtctgatcctgtccaagaagcgtgcgcagtacgagcgcgcctgg
ggcacgatcgaggagctcaaggagaaggacgagcccgtcaagggcaccgtcatcgaggtc
gtcaagggcggcctcatcctggacatcggcctccgtggcttcctgcccgcgtcgctggtc
gagatgcgccgtgtgcgcgacctgcagccgtacgtgggccgtgagctcgaggcgaagatc
atcgagctggacaagaaccgcaacaacgtggtcctgtcccgccgtgcctacctggagcag
acccagtccgaggtgcgcagcgagttcctcaacgcgctcgccaagggtcaggtccgcaag
ggcgtcgtgtcgtccatcgtcaacttcggtgccttcgtggacctgggtggcgtcgacggc
ctggtgcacgtctccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgag
gtcggtcaggaggtcacggtcgaggttctggacgtcgacatggaccgcgagcgcgtctcg
ctgtcgctgaaggcgacccaggaagacccgtggcgtcagttcgcccgcacccacgcgatc
ggccagatcgtgccgggcaaggtcaccaagctcgttccgttcggtgcgttcgtgcgcgtc
gaagagggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtggagatc
ccggagcaggtcgtccaggtcaacggcgacgtgatggtcaaggtcatcgacatcgacctc
gagcgtcgtcgcatctcgctgtcgctgaagcaggcgaacgagggcgtcacgccggagacc
gagttcgaccccactcagtacggcatggccgccgagtacgacaccgaggggaactacatc
taccccgagggcttcgacccggacacccaggagtggcaggacggcttcgacaagcagcgt
gaggagtgggagcgtcagtacgccgaggctcacacccgctacgaggctcacatgaagcag
gtcgtcaaggccgccgaggccgacgccgaggcagccgccgacgccgcgaccggtgtcacc
agcagcagcagcgactcgggcgagcagagctacacctccgctccggccgaggccaagagc
ggtggcacgctggccagcgacgagcagctcgcggctctccgcgagaagctgtcgggcggc
gcgtga
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