Amycolatopsis sp. BJA-103: BKN51_18245
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Entry
BKN51_18245 CDS
T05296
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb03030
DNA replication
amyb03410
Base excision repair
amyb03420
Nucleotide excision repair
amyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKN51_18245
03410 Base excision repair
BKN51_18245
03420 Nucleotide excision repair
BKN51_18245
03440 Homologous recombination
BKN51_18245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyb03032
]
BKN51_18245
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_18245
Enzymes [BR:
amyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKN51_18245
DNA replication proteins [BR:
amyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BKN51_18245
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BKN51_18245
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKN51_18245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AUI59950
LinkDB
All DBs
Position
complement(4294861..4297605)
Genome browser
AA seq
914 aa
AA seq
DB search
MSPSENTTVANATPATAQAERPKLLLIDGHSMAYRAFFALPAENFKTKTGQTTNAVFGFT
SMLINLLRDEAPTHLAVAFDLSRKTFRSETFKEYKANRSATPDEFKGQVGLVEDVLKVLG
IPALTKENYEADDIIATLTTQATAEGFDVLICTGDRDALQLVTDQVTVLYPKRGVSEMTR
FTPEAVEEKYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIRQFGSFNELIDRVD
EVKGKVGDALREHLGAVMLNRQLTELIRDVELELGPTGLELRPWDREAVHALFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGAKLAPGALAGWLSAHAGQGEPVGVAFRTTGASVRSD
LRAISFAAPDGEGAYVDVTEMDAEDDKALTAWLADEKIQKIGHELKVPLHAVGARGWAFA
GLVMDTALAAYLVRPGQRTFELDDLALRYLHRELRSEADTGDGQLSLLDGGGAEDLELKE
IQAELVKARAVAELAGALTKELEELGGAQLLVELELPLLQVITGLEAAGIAVDIEHLTNL
ESHYLSRVTQAADEAYAVIGKQVNLGSPKQLQVILFDELGMPKTKRTKTGYTTDAEALQS
LFEKTEHPFLQHLLEHRDATRLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSVDPNL
QNIPIRTEEGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDEGLIQAFNSGEDLHT
FVASRAFSLPPEEITPELRFRVKAMSYGLAYGLSAYGLSQQLRISTEDAKEQMEAYFSRF
GGVRDYLHSVVGDAAKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADI
IKVAMLNVHKALTEAKLKSRVLLQVHDELVLEVAEGEREQLEALVRQGMGSAYELAVPLE
VSVGYGRSWNDAAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgagtgagaacacgaccgttgccaacgccacacctgccaccgcacaggccgag
cggcccaagctgctgctgatcgacggccattcgatggcgtatcgcgcgttcttcgcgctg
cccgcggagaacttcaagacgaagaccgggcagacgacgaacgcggtgttcgggttcacc
tcgatgctcatcaacctgttgcgcgacgaagcgccgacccacctcgcggtggcgttcgac
ctttcccgcaagacgttccgctcggagacgttcaaggagtacaaggccaaccgcagcgcc
accccggacgagttcaagggccaggtcgggctggtcgaggacgtgctcaaggtcctcggc
atccccgcgctgaccaaggagaactacgaagccgacgacatcatcgccacgctcacgaca
caggcgaccgccgaaggcttcgacgtcctcatctgtacgggcgaccgtgacgcgctccag
ctggtgaccgaccaggtcaccgtgctgtacccgaagcgcggcgtgtcggagatgacccgg
ttcaccccggaggcggtcgaggagaagtacggcctcaccccggcccagtacccggatttc
gccgcgctgcgcggcgacccctcggacaacctgccgagcatccccggcgtcggcgagaag
acggccgcgaagtggatcaggcagttcggctccttcaacgagctgatcgaccgggtcgac
gaggtcaagggcaaggtcggcgacgcgctgcgcgagcacctcggcgccgtgatgctgaac
cgccagctcaccgaactgatccgcgacgtcgagctggagctcggcccgacaggtctcgag
ctgcgcccatgggatcgcgaagccgtccacgcactgttcgacgagctcgagttccgcgtc
ctgcgtgaccgtctcttcgccaccctgcagagcgccgagcccgaggccgaagaaggcttc
gaggtcagcggcgcgaagctcgctccgggcgcgctcgcgggctggctttccgcacacgcc
gggcagggcgagccggtcggcgtggcgttccgtaccaccggcgcctcggtccgctcggac
ctgagggccatcagcttcgcggcaccggacggcgaaggcgcttatgtcgacgtcaccgag
atggacgccgaggacgacaaggccctcaccgcctggctcgccgacgagaagatccagaag
atcggccacgagctcaaggtcccgctgcacgccgtcggcgcgcgcggctgggcgttcgcc
gggctcgtcatggacaccgcgctcgcggcgtacctggtccggccgggtcagcgcaccttc
gagctcgacgacctggccctgcggtacctgcaccgcgagctgcgttccgaggccgacacc
ggtgacggacagctctccctgctcgacggcggtggcgccgaggacctggagctgaaggag
atccaggccgagctggtcaaggcccgcgcggtcgccgagctggcgggtgcgctgaccaag
gagctcgaggaactcggcggcgcgcagctgctcgtcgagctggagctgccgctgctgcag
gtgatcaccggactcgaagccgcggggatcgcggtcgacatcgagcacctgacgaatctg
gaatcccactacctcagccgggtcacgcaggccgcggacgaggcgtacgcggtcatcggc
aagcaggtcaacctcggttcgccgaagcagctgcaggtgatcctgttcgacgagctcggc
atgccgaagaccaagcgcaccaagaccggttacaccaccgacgccgaggctctgcagagc
ctgttcgagaagaccgagcacccgttcctgcagcacctgctggagcaccgggacgcgacc
cggctgcgcaccacggtcgagggcctgatcaagtcggtcgccgacgacggccgcatccac
accacgctgctgcagacgatcgcggccaccgggcggctctcgtcggtcgacccgaacctg
cagaacatcccgatccgcaccgaggaaggccgccgcatccgcgacgcgttcgtcgtcggg
gacgggtacgccgagctgatgacggcggactacagccagatcgaaatgcggatcatggcg
cacctctcgcaggacgaagggctgatccaggccttcaacagcggtgaggacctgcacacg
ttcgtggcgtcgcgcgcgttctcgctcccgccggaggagatcacgccggaactgcggttc
cgggtcaaggcgatgtcgtacggcctcgcgtacgggctttcggcgtacgggctttcgcag
cagctgcggatttcgaccgaagacgccaaagaacagatggaagcgtatttctcccgtttc
ggcggcgtgcgcgactacctccattccgtcgtgggcgacgcggcgaaggtcggttacacc
gaaacgatcttcggccgccgccggtatctgccggatctcaacagcgacaaccgccagcgc
cgtgaaatggccgagcggatggcgctcaacgcgcccatccagggcagcgcggccgacatc
atcaaggtcgccatgctcaacgtccacaaggcgctgaccgaggcgaagctgaagagccgg
gtcttgctgcaggtccacgacgaactagtcctcgaggtagccgaaggcgagcgcgagcag
ctggaagcgttggtgcgccagggaatgggctcggcgtacgaactggccgtcccgcttgag
gtctcggtcgggtacgggcggtcctggaacgacgccgcgcattag
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