Amycolatopsis sp. BJA-103: BKN51_22415
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Entry
BKN51_22415 CDS
T05296
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb03030
DNA replication
amyb03430
Mismatch repair
amyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKN51_22415
03430 Mismatch repair
BKN51_22415
03440 Homologous recombination
BKN51_22415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyb03032
]
BKN51_22415
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_22415
Enzymes [BR:
amyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKN51_22415
DNA replication proteins [BR:
amyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKN51_22415
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKN51_22415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUI60667
UniProt:
A0A2N8N454
LinkDB
All DBs
Position
complement(5267298..5270882)
Genome browser
AA seq
1194 aa
AA seq
DB search
MSNDSFVHLHVHTEYSMLDGAAKIAPLFKEAARLGMPAVGMTDHGNMYGADEFYQQAVKH
DLKPIIGIEAYVAPESRFHKKPVFWGQANQRGSDEFGEGGDVSGSGSYTHMTMLAANATG
LRNLFKLSSLASMQGYYRKPRMDRELISENHEGIIATTGCPSGEVQTRLRLGQRTEAIQA
ASDYKDIFGGENFFLELMDHGLPIERSVREGLLEIGKLLDIRPLATNDSHYVTKDQADTH
SALLCVQAGKTLNDPNRFKFDGDGYYLKSAADMREYWDKEVPGAADSTLLIAERVESYKD
VYTHKDRLPFFEVPEGYDQGTWLREEVARGLKWRYPDGVPDEYYNERIEIELDVIIGKGF
PAYFLIVADLINYARKVGIRVGPGRGSAAGSLVAYVLGITNLDPIPQKLLFERFLNPERV
SMPDIDIDFDDRRRGEMIRYATDKYGVDKVAQVITFGTIKTKAAIKDSARVHFGQPGYAI
ADRISKALPPPIMAKDIPLSGIVDSKHERYGEAAEVRALVETDEECKTIFETARGLEGLI
RNAGVHACAVIMSCDPLTDAIPLWQRDDGSIITGWDYPSCENIGLLKMDFLGLRNLTVIG
DAIDNIKTNRGVDIDLDTLGVEDPETYKLLARGDTLGVFQLDGGPMRDLLRRMQPTVFDD
IVAVGALYRPGPMGMNAHNDYADRKNNRQKVKPIHPQLEEPLKEILADTYGLIVYQEQIM
HIGQKVAGYTMGRADVLRRAMGKKKKEVLDLEYEGFEAGMKASPLIDGGFSPEAVKALWD
TILPFAGYAFNKSHAAAYGLISYWTAYLKANFTPEYMAALLTSVGDNKDKSAVYLSECRR
LGIKVLPPDVNESALRFAAVGGDIRFGMGAVRNVGANVVESIIKTRAEKGKYSSFTDFLD
KSELVACNKRVIESLIKAGGFDSLGNSRLSMIQVHEDAVEAVVPLKRQEAMGQFDLFGFG
GDDDAEAAVSSSPLAHLKFGEEEYPRKQLLAYEREMLGLYVSAHPLDGAERILRKHAPRP
IAAIIADPPKEGELIISGLITSLERRVNKKGEPWAICTVEDMDASLEVLYFPKSYAMFSA
DLIEDNAVLVKGRVNWREDKMSIFGGGLVPLDLSEIGNGDEDLPLVLLAAAEKLDQSVVS
ELKQTLLAHKGETPVHLKLVGKNQTVFALYDYPVKVTSMLIGELKGIPGIAAST
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaacgattccttcgtccacctgcatgtgcacaccgagtactcgatgctcgacggt
gcggcgaagatcgcccccttgttcaaggaggcggcgcggctgggcatgcccgcggtcggc
atgaccgaccacggcaacatgtacggcgcggacgagttctatcagcaggcggtcaagcac
gacctcaagccgatcatcggcatcgaggcctacgtcgcgccggagagccggttccacaag
aagccggtgttctgggggcaggccaaccagcgtggctccgacgagttcggtgaaggcggc
gacgtctcgggtagcggttcgtacacccacatgacgatgctcgccgcgaacgcgaccggg
ctgcggaacctgttcaagctctcgtcgctcgcgagcatgcagggctactaccgcaagccc
cggatggaccgcgagctgatctcggagaaccacgaaggcatcatcgcgaccaccggctgc
ccgtccggtgaggtacagacgcgcctccggctggggcagcgcaccgaagcgatccaggcc
gcgtcggactacaaggacatcttcggcggtgagaacttcttcctcgagctgatggaccac
ggcctgccgatcgagcggtcggtccgcgagggcctgctcgagatcggcaagctgctcgac
atccggccgctggccacgaacgactcgcactacgtcaccaaggaccaggccgacacccac
tccgcgctgctgtgcgtgcaggcgggcaagacgctgaacgacccgaaccggttcaagttc
gacggtgacggctactacctgaagtcggccgccgacatgcgggagtactgggacaaggaa
gttcccggcgccgccgactcgacgctgctgatcgccgagcgcgtggagtcctacaaggac
gtctacacgcacaaggaccggctgccgttcttcgaggtccccgagggctacgaccaggga
acctggctgcgggaagaggtcgcgcgcggtctcaagtggcggtacccggacggcgtcccg
gacgagtactacaacgagcgcatcgagatcgagctcgacgtcatcatcgggaagggcttc
cccgcctacttcctcatcgtcgccgacctcatcaactacgcccgtaaagtcggcatccgc
gtcggccccggccgtggttcggccgccggctcgctggtcgcgtacgtgctcggtatcacc
aacctggacccgatcccgcaaaagctgctgttcgagcggttcctgaaccccgagcgcgtg
tccatgcccgatatcgacatcgacttcgacgaccgccgtcgcggcgagatgatccgctac
gccaccgacaagtacggcgtcgacaaggtcgcgcaggtcatcaccttcggcaccattaag
accaaggcggccatcaaggactccgcccgcgtccacttcggccagcccggctacgcgatc
gcggaccggatctcgaaggcgctgccgccgccgatcatggcgaaggacatcccgctctcg
ggcatcgtcgactccaagcacgagcgctacggcgaggccgccgaggtccgcgcgctcgtc
gaaaccgacgaagagtgcaagacgatcttcgagaccgcccgcggcctcgaaggcctgatc
cgcaacgccggcgtccacgcctgcgcggtcatcatgtcctgcgacccgctgaccgacgcg
atcccgctgtggcagcgtgacgacggctcgatcatcaccggctgggactacccgtcgtgc
gagaacatcggcctgctcaagatggacttcctgggcctgcggaacctcaccgtcatcggt
gacgcgatcgacaacatcaagaccaaccgcggggtcgacatcgacctcgacaccctcggc
gtcgaagacccggagacgtacaagctgctcgccagaggagacacactcggcgtgttccag
ctggacggcgggccgatgcgggatctgctgcgccggatgcagccgacggtcttcgacgac
atcgtggcggtgggcgcgctgtaccgccccggcccgatgggcatgaacgcgcacaacgac
tacgcggaccgcaagaacaatcggcagaaggtcaagccgatccacccgcagctcgaggag
cccctgaaggagatcctggccgacacctacggcctgatcgtctatcaggagcagatcatg
cacatcggccagaaggtggccggatacacgatgggccgcgcggacgtgctccgccgggcc
atgggtaagaagaagaaggaagtcctcgatctcgagtacgagggcttcgaggccgggatg
aaggccagcccgctgatcgacggcgggttctcgccggaagcggtgaaggcgctctgggac
acgatcctcccgttcgccggctacgcgttcaacaagagccacgcggccgcgtacggcctg
atctcctactggaccgcgtacctcaaggcgaacttcacgccggagtacatggccgcgctg
ctcacctcggtcggtgacaacaaggacaagtccgcggtctacctgtccgagtgccgtcgc
ctcggcatcaaggtgctcccgccggacgtcaacgagtcggcgctgaggttcgcggccgtc
gggggcgacatccgcttcggcatgggtgccgtccgcaacgtcggcgcgaacgtcgtcgag
tcgatcatcaagacccgggccgagaaggggaagtactcctccttcaccgacttcctcgac
aagtccgaactggtggcctgcaacaagcgggtcatcgaatcgctgatcaaggccggcggg
ttcgactcgctcggcaactcccggctttcgatgatccaggtgcacgaggacgcggtcgag
gccgtggtcccgctcaagcgccaggaggcgatgggccaattcgacctcttcggtttcggc
ggggacgacgacgcggaagccgccgtgtcttcttcaccgctcgcgcacctgaagttcggc
gaggaggagtacccgcgcaagcagctcctggcctacgaacgggagatgctcggtctgtac
gtctcggcgcacccgctggacggcgccgagcgcatcctgcgcaaacacgcgccgaggccg
atcgccgcgatcatcgccgacccgcccaaggaaggcgagctgatcatctccgggctgatc
acctcgctggagcgccgggtcaacaagaagggcgagccctgggcgatctgcaccgtcgag
gacatggacgcctcgctggaggtcctgtacttcccgaagtcgtacgcgatgttctccgcc
gacctcatcgaggacaacgcggtcctggtcaagggccgggtgaactggcgcgaggacaag
atgtccatcttcggcggcgggctcgtgccgctcgacctgtccgagatcgggaacggcgac
gaggacctgccgctcgtcctgctggccgcggcggagaagctcgaccagtcggtggtcagc
gaactgaagcagaccctgctggcgcacaagggcgaaacgccggtgcacctcaagctggtc
ggcaagaaccagacggtcttcgcgctctacgactatccggtcaaggtgacgtcgatgctg
atcggtgagctcaagggcatccccgggatcgccgccagcacctga
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