Amycolatopsis sp. BJA-103: BKN51_23050
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Entry
BKN51_23050 CDS
T05296
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb02020
Two-component system
amyb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKN51_23050
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BKN51_23050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyb03021
]
BKN51_23050
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
amyb02035
]
BKN51_23050
Transcription machinery [BR:
amyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKN51_23050
Bacterial motility proteins [BR:
amyb02035
]
Flagellar system
Flagellar assembly proteins
Stator
BKN51_23050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
KORA
Motif
Other DBs
NCBI-ProteinID:
AUI60776
LinkDB
All DBs
Position
complement(5402746..5403687)
Genome browser
AA seq
313 aa
AA seq
DB search
MTRRPEPAAHAHPHEHEHGDHPESHAENGGPMTADPHVTEAAGKHRPGGDGPAVASESRS
GYEVDAGIQALWREFTEAPDQIVRDRLVLHYAPLVKYVAGRVGTGLPTHVDVGDLIQSGI
FGLVDAIEKFEPARGLRFETYAMQRIRGAILDDLRSQDWVPRAVRSKAREAERALERLGA
RLNRTPTDAELAAELEISVDDLREFYGQMQLTSVIALEDLVAAGKDSGSLVDTLPDDGAV
DPVAVLVDQDNRRQLAQAIAQLTERDRIVVGLYYFESLTLAEIGKVLGVTESRVSQLHTR
AVMRLRAKLVEQA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgacccggcggcccgaaccggcggcgcacgcgcatccgcacgagcacgagcacggagac
caccctgagtcgcatgctgagaacggcggtccgatgaccgccgacccacatgtcaccgaa
gccgccgggaaacaccgtcccggcggggacggtcctgccgtcgcgtccgaatcgcggtcg
ggctacgaggtggacgccgggatccaggcgctgtggcgggagttcaccgaggcgccggac
cagatcgtgcgcgacaggctcgtgctgcactacgcaccgctcgtcaaatacgtcgcgggc
cgcgtcggcaccggcctgccgacccacgtcgacgtcggcgacctgatccagtccgggatc
ttcggcctggtcgacgcgatcgagaagttcgaacccgccaggggcctgcggttcgagacc
tacgccatgcagcgcatccggggcgcgatcctcgacgacctccgttcccaggactgggtc
ccccgggcggtgcgcagcaaggcccgcgaggccgaacgcgcgctggaacgcctcggcgcc
cggctgaaccgcacgccgaccgacgccgaactggcggccgagctcgaaatcagcgtcgac
gacctgcgcgagttctacggccagatgcagctgaccagcgtcatcgcgctcgaagacctg
gtcgccgccggcaaggacagcggctcgctggtcgacaccctgcccgacgacggcgccgtc
gacccggtggccgtcctggtcgaccaggacaaccgccgccagctggcacaggcgatcgcc
cagctcaccgaacgcgaccggatcgtggtcggcctctactacttcgagagcctgaccctc
gccgagatcggcaaggtcctcggcgtcaccgagtcccgggtcagccagctgcacacccgc
gccgtcatgcggctgcgcgcgaaactggtcgagcaggcctga
DBGET
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