Amycolatopsis sp. BJA-103: BKN51_24245
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Entry
BKN51_24245 CDS
T05296
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amyb
Amycolatopsis sp. BJA-103
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyb03032
]
BKN51_24245
03036 Chromosome and associated proteins [BR:
amyb03036
]
BKN51_24245
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_24245
DNA replication proteins [BR:
amyb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BKN51_24245
Chromosome and associated proteins [BR:
amyb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BKN51_24245
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BKN51_24245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AUI60990
UniProt:
A0A2N8N374
LinkDB
All DBs
Position
complement(5657478..5658143)
Genome browser
AA seq
221 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGSKKLPKATAVKRATAGTTTRAAATRATTT
RTAASRPAATRTTTTRTRAAAATTRTAAKPAAKATATKAAAKPAAAKAAPKTAAKATTRA
TTAKKATATKAAAKPAAKATAAKAPAKKAPAKRTSAAAKKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgcctgggcgacaagaaggtc
gcgtcggaggccgtcgatggccttgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgcccgtaccgcg
cgtaacccgcgcaccggtgagaccgtccgcgtcaagaagaccaacgtgcccgctttccgc
gccggcacgaccttcaaggacgtcatcagcggttcgaagaagctgccgaaggccaccgct
gtgaagcgcgcgaccgccggcaccaccactcgggccgccgccacccgcgcgacgacgacc
cggacggccgccagccgcccggccgcgacgcgcaccaccaccacgcggactcgcgccgcc
gccgccacgacgcgcaccgccgcgaagccggccgccaaggcgaccgcgaccaaggccgcc
gccaagccggcagcggccaaggcggcgccgaagaccgcggccaaggccacgactcgcgcc
accacggccaagaaggcgaccgccaccaaggccgccgcgaagccggccgccaaggcgact
gccgccaaggctcccgccaagaaggctccggccaagcggacttcggcggccgcgaagaag
aagtaa
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