Amycolatopsis sp. BJA-103: BKN51_27585
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Entry
BKN51_27585 CDS
T05296
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amyb
Amycolatopsis sp. BJA-103
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_27585
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKN51_27585
Archaeal homologous recombinant proteins
BKN51_27585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
TsaE
NACHT
AAA_21
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AUI61563
UniProt:
A0A2N8N1I9
LinkDB
All DBs
Position
complement(6366291..6369242)
Genome browser
AA seq
983 aa
AA seq
DB search
MRLHRLEVAAFGPYAGREVVDFDVLGADGLFLLHGDTGAGKTTLLDAIAFALFGTVPGAR
GEVKRLRCDLAEPDHVTEVVLELTVQGQRMRIARNPEYQRPKRRGEGMTLQQAKAVLSWV
GTVPAGHVAEGITRIDEVARTVERLIGMTHEQFFQVVLLPQGEFARFLRANTAEREELLE
RLFGTERFSDVENWFADLRAERGRELQARQQSLREWVARFAQVARQEAPEEGQAEWVDAV
LAESAELVAQARGQEEKARKAAKTAEAVWQENRSTAERIRRVRTAYTRLSAIAEQADQRA
EWAEEVEAAHRAAGVAAEADQLERRSNQLAEAEAAEALRTREVPDAADSSAAELRARAGG
LREEAGALAELVAEGEQQQRDLVRRDQLSTVAKEAEEQAEELVAELESVPEKVTVLRAEA
LAAAEAEAKLEGVRTRFDELTALVRDADEVPRAKQAVEQARGLVRDAVDAHQQARQHRLD
LRERRLDGMAAELAAGLAAGEDCPVCGATEHPAPATHTGGLVDPEDERRAEAAEQQADNR
REKAKASLLEAEGRLKTLVERLRERTAEALRAELGEARELGASLSEKARRKSVLEKQLLE
LERKTEQLTERRRVTGQRAAEAATEVRGLTERLAERERRLESARGEFADVAARRRHLLGF
ATRLDALAEARLGVVGARERRDEQAKLVEKALQAKGFADLDAMRAASRPDEQITKLETSL
ADAKVMEESERRALAAPELFGISPEDEIDVVASEEAARKTQGEAEQAFAALRTATSRHTD
LTGVAERMASLMAGLAPVEERYLELKALAEVVNGRGQNARKMSLRSYVLAARLEEVAVAA
TARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSGTVRPAKTLSGGESFLASLSLA
LGLADVVAAETGGALLDTLFIDEGFGTLDAETLDIVMNILDELRAGGRVVGLVSHVEELR
QRIPTRLRIRKARTGSSVEIHAA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcaccggttggaggtcgccgctttcggcccgtacgcgggccgcgaggtggtg
gacttcgacgtgctcggcgccgacgggttgttcctgctgcacggcgacaccggcgcgggc
aagacgaccctgctcgacgccatcgcgttcgcgttgttcggcaccgtccccggtgctcgc
ggcgaggtcaagcggctgcgctgcgatctcgccgagccggatcatgtcaccgaggtcgtc
ctcgaactgaccgtgcagggccagcggatgcggatcgcgcgcaaccccgagtaccagcgg
ccgaagcgccgtggcgaggggatgaccctccagcaggccaaggcggtgctgagctgggtc
ggcacggtgcccgccgggcacgtggccgaaggcatcacgcggatcgacgaggtcgcgcgc
accgtcgagcggctcatcggcatgacgcacgagcagttcttccaggtggtcttgctgccg
cagggcgagttcgcgcggttcctgcgggcgaacacggccgaacgcgaggaactgctggag
cggctgttcggcaccgagcggttctccgacgtcgaaaactggttcgcggatctgcgcgcc
gagcgtggccgtgagctgcaggcgcggcagcaatcgctgcgggagtgggtcgcgcggttc
gcgcaggtcgcccggcaggaggcgcccgaggagggacaggccgagtgggtcgacgcggtc
ctcgcggagtccgccgagcttgtggcccaggcacgaggacaggaagagaaggcgcgtaag
gccgcgaagacggccgaggccgtgtggcaggagaaccggtccaccgccgagcgcatccgc
cgggtgcgcaccgcgtacacgcgtctttcggcgatcgccgagcaggcggatcagcgcgcg
gagtgggcggaagaggtcgaagcggcccatcgtgcggcaggcgtcgccgctgaggccgat
cagctcgaacgccgctcgaaccagctcgccgaggcggaggccgcggaagcgctccggacc
cgggaagtgccggacgccgcggacagttccgccgccgaactccgcgcccgtgccggcggg
ctgcgcgaagaagcgggcgcgctggccgaactcgtggccgaaggcgagcagcagcaacgg
gatctggtccgccgagatcagctgagcaccgtcgcgaaggaggcggaggagcaggccgag
gaactcgtcgccgaactcgaatccgtgccggagaaggtcacggtgttgcgtgccgaggcg
ctcgcggccgccgaagccgaggcgaaactcgaaggcgtccgcacccgtttcgacgagttg
accgcactggtccgggacgccgatgaggtgcctcgggcgaagcaggccgtcgagcaggct
cgtggactggtccgcgacgccgtcgacgcccaccagcaggcgcggcagcatcgtctggac
ctgcgtgagcgccgcctcgacgggatggcggccgaactcgccgccggcctggccgcgggt
gaggactgcccggtgtgcggcgcgaccgagcatccggcgcccgccacgcacaccggtggc
ctcgtcgatcccgaggacgaacgccgcgccgaagccgccgagcagcaggccgacaatcgg
cgggagaaggcgaaagcctcgctgctggaagccgaaggacggcttaagacgctggtcgag
cggttgcgcgagcgcaccgccgaggcgctgcgggccgaactcggcgaggcgcgggagctg
ggcgcgtcgctgtcggaaaaggctcgtcgcaagtccgtgctggagaagcagctcctcgaa
ctggaacggaagaccgagcagctgaccgaacgccgtcgcgtgaccgggcagcgggcggcc
gaggccgcgaccgaggtccggggtctcacggaacggctggccgaacgggaacgacggctg
gaaagcgcgcgcggcgagttcgccgacgtcgccgcccggcggcggcacctgctcggtttc
gcgacccgcctcgacgcgctcgccgaagcgcggctcggtgtcgtgggtgcccgcgagcgt
cgcgacgagcaggcgaaactcgtcgagaaggccttgcaggccaagggtttcgcggatctc
gacgcgatgcgggccgcgtcacggccggacgagcagatcacgaaactggagaccagcctc
gccgacgcgaaggtgatggaggagtccgagcggcgcgcgttggcggcgccggaactcttc
ggcatctcgcccgaggacgagatcgacgtcgtggcctccgaagaggcggcgcggaaaacc
cagggcgaagccgagcaggctttcgcggcgctgcgcacggccacgtcccggcacaccgac
ctgaccggcgtggccgagcggatggcgtccctgatggcggggctggcgccggtcgaagag
cggtacctcgaactgaaggcgctggccgaggtcgtcaacgggcgcgggcagaacgcgcgg
aagatgtcgctgcgctcgtacgtgctcgccgcgagactggaagaggtcgcggtcgcggcg
accgcccgcctgcggacgatgagccagggccggtattccttcgtgcactccgacgcggcc
ggtgcccggggcactcgcggcgggctcgggctcgacgtgctcgacgactactccggcacc
gtccggcccgcgaagacgctctccggcggcgagtccttcctcgcgtcgctctcactggcg
ctgggccttgccgacgtcgtcgccgccgagacaggtggggcgctactggacacgctgttc
atcgacgagggtttcggcacgctggacgccgagacgctcgacatcgtcatgaacatcctc
gacgagcttcgcgccggtggccgggtggtcgggctggtgtcgcacgtggaggaactgcgg
cagcggatcccaacccggctgcggatccggaaggcgcgtacgggctcctcggtcgaaatc
cacgccgcctga
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