Amycolatopsis sp. BJA-103: BKN51_35625
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Entry
BKN51_35625 CDS
T05296
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
amyb
Amycolatopsis sp. BJA-103
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_35625
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BKN51_35625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
SSB
Motif
Other DBs
NCBI-ProteinID:
AUI62954
LinkDB
All DBs
Position
complement(8057341..8057721)
Genome browser
AA seq
126 aa
AA seq
DB search
MSKQKSRNTRIEMELRKALFARGLRYRVHRRPVKGVRREADVVFGPARVAVFVDGCFWHG
CPEHATWPKNNADFWRTKIETNRRRDLDTDARLAEAGWLAVRVWEHEAAEAAAARVHEIV
LARRPG
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagaagtctcgaaatactcgaatcgagatggaactgcgcaaagccttgttc
gcccgagggttgcggtaccgcgtccatcgcaggccggtgaaaggtgtacgccgggaagcc
gacgtcgtgttcggtcctgcacgggtcgcggtcttcgtggacggttgcttctggcatggc
tgtccggagcacgcgacgtggccgaagaacaacgccgacttctggcgcacgaagatcgaa
accaatcgccggcgcgacctggacaccgatgctcgccttgccgaagcaggatggctggct
gtgcgggtatgggaacacgaagcagccgaagccgcggccgcccgcgtgcacgaaatcgtg
ctcgccagacggccgggctga
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