Amycolatopsis sp. BJA-103: BKN51_38400
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Entry
BKN51_38400 CDS
T05296
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb00020
Citrate cycle (TCA cycle)
amyb00190
Oxidative phosphorylation
amyb00650
Butanoate metabolism
amyb00720
Other carbon fixation pathways
amyb01100
Metabolic pathways
amyb01110
Biosynthesis of secondary metabolites
amyb01120
Microbial metabolism in diverse environments
amyb01200
Carbon metabolism
Module
amyb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amyb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amyb_M00149
Succinate dehydrogenase, prokaryotes
amyb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKN51_38400
00650 Butanoate metabolism
BKN51_38400
09102 Energy metabolism
00190 Oxidative phosphorylation
BKN51_38400
00720 Other carbon fixation pathways
BKN51_38400
Enzymes [BR:
amyb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BKN51_38400
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
FAD_oxidored
Kinase-PPPase
Motif
Other DBs
NCBI-ProteinID:
AUI63446
LinkDB
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Position
complement(8597710..8599464)
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AA seq
584 aa
AA seq
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MQFHKYDVVIVGAGGAGMRAAIESGQRTRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTIKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVKHGTEFYNEFYVLDLVLTPDENGNPVASG
VVAYELATGELHVFQAKSIVFATGGAGKIFKTTSNAHTLTGDGLGIIFRKGLPLEDMEFF
QFHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVQEVLQ
GRGCGPNKDYVVLDVTHIPEETLNAKLPDIMEFSRTYLGVDPVTEPVPVFPTCHYVMGGI
PTNIHGEALRDNENVIPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAGIAAAEYAL
AHDFVELPENPTTIVEDQLSGLLSEHGDERVADIRTELQRTMDSHASVYRTEDTLKQALT
DVQALKDRYERITVSDKGKRYNTDVLEAVELGFLLELAEVLVVGALARKESRGGHAREDY
PNRDDTNFMRHTMAYKQGSGLASDIRLDYKPVTFTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtggtgatcgtcggcgccggaggcgccggcatgcgcgcg
gccatcgagtccggccagcgcacgcgcaccgcggtcctcaccaagctctacccgacgcgt
tcgcacaccggcgccgcgcagggcggcatgtgcgccgcgctggcgaacgtcgaagaggac
aactgggagtggcacaccttcgacacgatcaagggcggcgactacctggtcgaccaggac
gccgccgagatcatggcgaaggaagccatcgacgcggtcctcgacctcgagaagatgggc
ctgccgttcaaccggacgcccgagggcaagatcgaccagcgccgcttcggcgggcacacc
cgtgaccacggcaaggccgcggtgcgccgcgcctgctacgccgcggaccgcaccgggcac
atgatcctgcagacgctgtaccaaaactgcgtcaagcacggcacggagttctacaacgag
ttctacgtgctcgacctggtgctgaccccggacgagaacggcaacccggtcgcctccggc
gtcgtcgcctacgagctggccaccggcgagctgcacgtcttccaggcgaagtcgatcgtg
ttcgccaccggcggcgcgggcaagatcttcaagacgacgtcgaacgcgcacaccctcacc
ggtgacggcctcggcatcatcttccgcaagggcctgccgctggaggacatggagttcttc
cagttccacccgacaggtctcgccgggctcggcatcctcatctccgaggccgtgcgcggt
gaaggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgccccgacg
atcaaggacctcgcgccgcgcgacatcgtcgcccggtcgatggtgcaggaagtgctgcag
ggccgcggttgcggtccgaacaaggactacgtcgtcctcgacgtcacgcacatcccggaa
gagacgctgaacgcgaagctcccggacatcatggagttctcccggacgtacctgggcgtc
gacccggtgaccgagccggtgccggtgttcccgacctgtcactacgtgatgggcggaatc
ccgacgaacatccacggcgaagcgttgcgggacaacgagaacgtcatccccggcctgtac
gccgcgggtgaggtggcgtgcgtgtccgtgcacggctcgaaccgcctcggcaccaactcg
ctgctcgacatcaacgtcttcgggcgtcgcgcgggcatcgcggccgccgagtacgcgctg
gcacacgacttcgtcgaactgccggagaacccgaccaccatcgtcgaagaccagctctcg
ggcctgctttcggagcacggtgacgagcgcgtcgccgacatccgcaccgaactgcagcgg
acgatggactcgcacgcttccgtgtaccgcaccgaggacacgctgaagcaggcgctgacc
gacgtgcaggcactgaaggaccggtacgagcggatcactgtgtcggacaaggggaagcgg
tacaacaccgacgtcctcgaagccgtcgaactgggcttcctgctcgaactcgccgaggtt
ctcgtcgtcggcgccctggcgcgcaaggagtcccgcggcggtcacgcgcgcgaggactac
ccgaaccgcgacgacacgaacttcatgcggcacaccatggcctacaagcagggttctggt
cttgcctccgatatccgactggactacaagccggtgaccttcacccgctacgaaccgatg
gagcggaagtactga
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