Amycolatopsis sp. BJA-103: BKN51_40225
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Entry
BKN51_40225 CDS
T05296
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb03420
Nucleotide excision repair
amyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKN51_40225
03430 Mismatch repair
BKN51_40225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_40225
Enzymes [BR:
amyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKN51_40225
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKN51_40225
MMR (mismatch excision repair)
Other MMR factors
BKN51_40225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF5867
Motif
Other DBs
NCBI-ProteinID:
AUI63771
UniProt:
A0A2N8MQ08
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All DBs
Position
8982740..8984827
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AA seq
695 aa
AA seq
DB search
MVSASSPKSRPGLLDGLDPEQRAAACAPRGPVCVLAGAGTGKTRTITHRIAHLVRSGHVA
AGQVLAVTFTTRAAGEMRARLRGLGVDAAQALTFHAAARRQLRYFWPQVVGDRPWELLEN
KFRYISQAANKAGLGTETELLRDLASEIEWSKASLVSPDDYPAVAARTQRDTPAPSSQVA
EVYRNYEKVKNAAQVLDFDDLLLHTTAVLEEHTVVAQEFRERYRCFVVDEYQDVTPLQQR
LLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLEFTRRFPEATVVRLERDYRSTPEVVA
LANQVIGAARGRPAGSRLKLIGQRPSGPVPRFAEYDDETAEAAAVARRIRDLLDGGVAAS
EIAVLYRVNAQSEAYEQALAEVGIPYLVRGGERFFARAEVRQAMSALRMASTDADTGELV
TRVRSVLAKVGLTDQPPAGGAAKERWDALLSIVELAEELASTVEDADLPRFVAELEQRAN
AQHPPTVEGITLASLHAAKGLEWDAVFLVGLAEGTMPILHADGDDAAIEEERRLFYVGVT
RAREHLSLSWALARTAGNRRNRRRSRFLYGLIPEDHPAARVARSQQPKQPGTKARCRVCG
GPLLETLDIKLGRCSRCPSNVDEQLLEKLRSWRGERSRELKVPAFVVFTDATLVAIAEQR
PTDDTALCAISGIGATKLERFGAEVLDVVRASVES
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggttagcgcatcgtccccgaagagtcgtccaggcctgctcgatgggctcgatcccgag
caacgcgccgccgcctgcgcgccgagggggccggtctgtgtgctcgccggagcgggaacc
ggcaagacgcggacgatcacgcatcgcatcgcccatttggtccgctccggacacgtcgcc
gctggtcaggtcctcgcagtcaccttcacgacccgcgccgcgggtgagatgcgcgcgcgc
cttcggggcttgggtgtcgacgccgcccaggcgctcacttttcacgccgccgctcgccgc
cagctccggtacttctggccgcaggtcgtcggggaccggccctgggagctgctcgagaac
aagttccgctacatcagccaagccgccaacaaggccggtctcggcaccgagacggagctc
ctgcgcgacctcgccagtgagatcgagtggagcaaggcctctttggtatcgccggacgac
tacccggccgtcgccgcgcgtacgcagcgggacaccccagccccctcgtcgcaggtcgcg
gaggtgtaccgcaactacgagaaggtcaagaacgccgcgcaggtcctcgatttcgacgat
ctgctcctgcacaccacggccgttctcgaggagcacacggtggtggcccaggagtttcgc
gagcgctaccgctgcttcgtcgtcgacgagtaccaggacgtcaccccactgcagcaacgg
ttgctcgacgcgtggctcggcggccgcgacgacctgaccgtggtcggcgacgccaaccag
accatctattcgttcgggggcgcctcgccccggccgctgctggagttcacgcgacggttc
cccgaggcgacggtcgtgaggctcgagcgggattaccgctcgactccggaggtcgtggct
ctcgccaatcaggtgatcggtgccgcccgcggccgtcccgcggggtcgaggctgaaactc
atcggccagcgaccctcggggcctgtcccgcgtttcgccgagtacgacgacgagaccgcc
gaggcggccgcagtcgcacgcaggatccgtgatttgctcgacggcggagttgcggccagc
gagatcgcggtgctctaccgagtcaacgcccagtcagaggcctatgagcaggcactggcg
gaggtgggcatcccgtacctggtccgcggcggcgagcgattcttcgccagggccgaggtc
cggcaggcgatgtcggcattgcggatggcgtcgaccgacgccgacaccggcgagctcgtg
accagggttcgctccgtgctcgcgaaggtggggctcaccgaccagcccccggccggaggt
gcggcgaaggagcgatgggacgcgcttttgtcgatcgtcgagctggcggaggagctggct
tccaccgtcgaggacgccgacctgccccgattcgtggcggagctcgagcagcgggcgaac
gcacagcacccgccgacggtggagggcatcaccctggcctcgcttcacgcggcgaagggc
ctcgagtgggacgccgtgttcctcgtagggcttgccgaggggaccatgccgatcctccat
gccgacggtgacgacgcggccatcgaagaagagcgccgtcttttctacgtcggcgtcact
cgagcacgagagcacctctcgctgtcgtgggccttggccaggacggcgggaaaccgccgc
aatcggcgacgcagccgattcctctacggactgatccccgaagaccacccggcggcgagg
gtcgcccgatcccagcagccgaagcagcccggtaccaaggcgcggtgccgggtatgcggc
gggccgctcttggagaccctggacatcaagctgggccgctgctcccgttgcccgtccaac
gtggacgagcaactgctcgaaaagctgaggtcctggcgaggagaacgctctcgcgagctc
aaggtgccggccttcgtcgtcttcacggacgcgaccctggtcgccatcgccgagcagcgt
ccgaccgatgacacagcgttgtgtgcgatctccgggatcggcgcgacgaagctcgaacgc
ttcggagcggaagttctcgacgtcgtacgggcctcggtggagtcttga
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