Amycolatopsis sp. AA4: CU254_00665
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Entry
CU254_00665 CDS
T05278
Name
(GenBank) GGDEF domain-containing protein
Organism
amyc
Amycolatopsis sp. AA4
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_8
PAS_4
Diguanyl_cycl_sensor
PAS_7
PAS_3
MEKHLA
Motif
Other DBs
NCBI-ProteinID:
ATY09155
LinkDB
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Position
complement(141560..144265)
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AA seq
901 aa
AA seq
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MEADALAGEPGGITRRAQLAGLRPDAGAGVLFSLHASEPATLTWLPGLDAVLGLPGATGK
ELCDRLTELLRPLTANLRRTPPGRDFELEQPQDGPDGTPRRIRLRARTVGERDHTTGLLG
VASAVAEAAPEKSELAELSDRYQLLMEQSPDAICVYSGGVVTYANQAALDLFGARAAHEV
VSREFADFVAAESTQLLEDPSAEPREAVLKRLDGSKFVAETVSVRTSDSNPPSFQVVIRD
STVKHAAAAAVRAQEALVTHVSDAIVTITGEGIVTGWNPAAETVYGWPAPEALGRRVHEV
LGIDPDPASIRDGVAQQTHRGRDGSPRQVRVSATETVDGFLLVCTDETARRRVEQHYATV
VAALDEGVLVIGPTGLIQSANPSACRILGVPEPELLGVSCTTLVLFDEDGNRIPDDELPS
MHTRRTGVTHNGLVVRLRRPDGRDVWVSLTSRLLDSDDPNGVSVVTSFTDITERRAISAR
LAHEATHDPLTRLANRTLVLDRLDRRDGAESAAVLFLDLDKFKLINDSLGHPVGDQVLRI
AGERLRRATGPDDVVGRLGGDEFVVVTSATTGPAQVGVFAAHLRSVLSEPVSVHGRQLHL
DASMGIVLVEPDDRRTAEDLLRDADVAMYQAKSRGRGRFEFFDVALRERMQRRLRMEQDL
RDAVHSGQLWPAYQPVVDLRTGEMVGVEALLRWTHPKHGAISPAEFIPLAEESELINVLG
KYVLRDTTRELAALRTGRGLDLSLKVNLSVRQLDDPHLVPAVRDALATTGLPPGSLTLEV
TESALMRDTSAAAEVLSALRSLGVLLAIDDFGTGYSSLAQLRRLTLDTLKIDRSFITGIA
DSRDAAAIVTSIIAMAHAVDLTVVAEGVETAEELALLRELGCDQAQGYHLGRPLAAAELF
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgacgccctggccggcgaaccgggtgggatcacccggcgcgcccagctcgcg
ggcctgcggccggacgccggcgcgggggtcctgttctccctgcacgcctccgaaccggcg
accctcacctggctgcccggcctcgacgcggtgctcggcctccccggcgcgaccggcaag
gagctgtgcgaccggctcaccgagctgctccgcccgctcaccgcgaacctccgccgcacc
ccgcccggccgcgatttcgaactcgaacagccgcaggacggccccgacggcacgccgcgc
cgcatccgcctgcgcgcgcggaccgtcggcgagcgagaccacacgaccggcctgctcggc
gtcgcctcggcggtcgcggaagccgcgccggaaaagtccgagctcgccgagctgtccgac
cgctaccagctgctgatggagcaaagcccggacgcgatctgcgtgtactcgggcggcgtc
gtcacctacgccaaccaggccgcgctcgacctgttcggggcacgggcggcgcacgaggtc
gtcagccgcgagttcgcggacttcgtggccgcggaatccacgcagctgctggaggatccc
agcgcggaaccccgcgaagcggtgctgaaacggttggacgggagcaaattcgtggcggaa
accgtgtcggtgcgcacgagcgactcgaacccgccgtcgttccaggtcgtgatccgcgac
agcactgtcaaacacgccgccgcagccgccgtccgcgcgcaggaagcgctggtcacgcac
gtcagcgacgccatcgtcacgatcaccggcgagggcatcgtcaccggatggaacccggcc
gccgagaccgtttacggctggccggccccggaggcgctcggcaggcgggtgcacgaggtc
ctcggcatcgacccggacccggcgtcgatccgcgacggcgtcgcccagcaaacccaccgc
ggccgggacggttcgccgcggcaggtccgggtgtccgcgaccgaaaccgtcgacgggttc
ctcctggtctgcaccgacgaaaccgcgcgtcggcgcgtcgaacagcactacgcgacggtc
gtcgcggcgctcgacgagggcgtgctcgtgatcgggccgaccggactgatccagtccgcg
aacccgtccgcctgccgcatcctcggcgtccccgagccggagctgctcggcgtgtcgtgc
accacgctcgtgctgttcgacgaggacggcaaccggatcccggacgacgagctgccgtcc
atgcacacgcgccgcaccggggtcacgcacaacggactggtcgtgcgcctgcgccgcccc
gacggccgcgacgtgtgggtgtcgctgacctcacggctgctcgattcggacgacccgaac
ggcgtctcggtggtcacgtccttcaccgacatcaccgaacggcgcgcgatcagcgcccgg
ctggcccacgaggccacccacgacccgctgacccggctcgccaaccgcaccctggtgctg
gaccggctcgaccgccgcgacggggccgagtccgccgccgtgctgttcctcgacctggac
aagttcaagctcatcaacgattccctcgggcatccggtcggcgaccaggtcctgcgcatc
gccggcgaacgcctgcgccgggccactggccccgacgacgtcgtcggcaggctgggcggc
gacgagttcgtggtcgtcacgtccgcgacgaccggcccggcccaggtcggcgtgttcgcc
gcgcacctgcggtcggtgctgtcggaaccggtatccgtgcacggcagacagctgcatctc
gacgcgagcatgggcatcgtcctcgtcgaaccggacgaccgccgcaccgccgaggacttg
ctgcgcgacgcggatgtcgcgatgtaccaagcgaaatcccgcggccgcggccggttcgag
ttcttcgacgtcgccctgcgggaacgcatgcagcgccggctgcggatggagcaggacctc
cgcgacgctgtccacagtggacagctatggccggcttaccagccggtggtcgacctgcgc
accggggaaatggtcggcgtcgaggcgctgctgcgctggacccacccgaaacacggcgcg
atctcgcccgcggaattcatccccctggccgaggaaagcgaactgatcaacgtgctgggc
aagtacgtcctgcgcgacaccacccgcgaactggccgccctgcgcaccggccgaggcctc
gacctgagtttgaaggtcaacctctccgtgcggcagctggacgacccgcatctggtgccc
gcggtccgcgacgcactcgccaccaccggccttccgcccggctcgctgacgctggaagtc
accgaaagcgcgctcatgcgcgacacctcggcagccgcggaagtgttgtccgccttgcgt
tctctcggtgttctgctggcgatcgacgacttcggcaccggctattcttccctggcgcag
ctgcgtcggctgaccttggacacgctcaagatcgaccgctccttcatcaccggaatcgcc
gactcgcgcgacgcggccgcgatcgtcacgagcatcatcgcgatggcgcacgcggtggat
ctgaccgtggtcgcggaaggcgtcgagaccgccgaagaactggcgctgctgcgggaactc
ggctgcgaccaggcccagggctaccacctgggccggccgctggctgccgcggagctgttt
cagtaa
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