Amycolatopsis sp. AA4: CU254_02105
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Entry
CU254_02105 CDS
T05278
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyc03016
]
CU254_02105
Enzymes [BR:
amyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CU254_02105
Transfer RNA biogenesis [BR:
amyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CU254_02105
Prokaryotic type
CU254_02105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ATY09405
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Position
407033..407869
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AA seq
278 aa
AA seq
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MDVSYDGTDFSGWARQPGRRTVQAELEQALQRQPPGEAVPKSVVVAGRTDAGVHATGQVV
HVDVVPFAPGAPGRIPVDERGIPDLTRMRGRWNKLLPADVRVLNARVAPDGFDARFSAIR
RHYRYRVSDAPWGVDPLRRNDTLAWGRPLSTERMNAAAAELLGLQDFAAYCKQREGGTTI
RELQRLEWTRIDEHLLEVRVSADAFCHSMVRSLVGVLLLVGDGRRGTGWPGEVLASGTRD
SAVAPAHGLTLTAVDYPPDELLAARAEQTRNVRSSTEL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttggacgtgagctacgacggcacggacttctccggctgggcccgccagcccggccgccgc
accgtgcaggcagaactggagcaggcgctgcagcggcagccgccgggggaagcggtgccg
aaatccgtggtcgtcgcgggccgcacggacgccggggtgcacgcgaccggacaggtcgtg
cacgtcgacgtcgtcccgttcgcgcccggtgcgccgggccggatacccgtggacgaacgg
ggaatcccggacctgacgcgcatgcgcggccgctggaacaaacttctgcccgccgatgtg
cgggtgctgaacgcacgcgtggccccggacggtttcgacgcccggttctcggccatccgg
cggcactaccgttaccgcgtctccgacgctccgtggggcgtcgatccgttgcgccgcaac
gacaccctggcctggggccgtccactgtcgacagagcggatgaacgctgccgcggcggaa
ttgctgggactgcaggacttcgcggcgtactgcaaacagcgcgagggcggcacgacgatc
cgcgagctgcagcgtctggagtggacgcggatcgacgagcacctgctggaagtgcgggtt
tccgcggacgcgttctgtcattcgatggtccgcagtctggtcggggtcttgctgctcgtg
ggggacgggcggcggggaaccgggtggccgggcgaggtgctggcgagcgggacgcgggac
agcgcggtcgccccggcgcacgggctgacgttgacggcggtggactatccgccggacgag
ctgctggccgcgcgggcggagcagacccggaacgtgcggtcgtcgaccgagctttag
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