Amycolatopsis sp. AA4: CU254_03390
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Entry
CU254_03390 CDS
T05278
Name
(GenBank) RNA polymerase subunit sigma
Organism
amyc
Amycolatopsis sp. AA4
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
DUF11
Motif
Other DBs
NCBI-ProteinID:
ATY09614
UniProt:
A0A2K8LMF8
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Position
complement(676802..679078)
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AA seq
758 aa
AA seq
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MSTVPADLSGKSDAELIAEVRAGKIASYGPLYERHSGAAHNLARQLARSSSEADDLVSEA
FSKVLDTLRGGKGPDTAFRAYLLTALRHTAYDKTRRDRRIDLNEDMSDVGGAAGEALTVP
FSDTAVAGLERTMAAKAFARLPERWQAVLWHTEIEQQSPAEVAPLLGLTANGVSALAYRA
REGLRQAYLQVHLQETGADRCRATADRLGAWTRDGLSKRERSQVENHLDECEKCRVLAAE
LADVNGSLRAIIAPIVLGGAALGYLATIGAAKASAATAGAAVGAGAAAAGGAKAGAAAAA
SAPRQFAGVAMSGAAMVAAVAVALAAGGGTQTIPAAQQAPAPPPAAAPAPAPKPAPPAPP
AAPPAPPAPPPAQPAPPAAPPPAAPPAAPPAAPPAQPPAQNPPVNAPQLSASLPPNGVEL
QPGGGPVALPITVRNNGNSVSDPVQATLNLPPGVRAVQANGGGAVGAYSSEAAAQSGPTQ
VACPGGTGTVTCKTGSGLQPGQSAVLMFRLQADADAKGGEVKGSVTAGTSLKVDVVVRVK
VNPPKDALTLAAKAHGAMWKLQPLVEADVQNTGQTTKPVTITFDHRATGQVSFKQFKCTS
TDSSMSCTSAKPLAPGELASLWVLVDRKPFDGPLTVTVNASLGAASAQPVAVPLGCWWNM
CHDPTIGPLSTTSVPLPTTTSTSKSHTPSSTKHPKPSVTLPTSTSPDDDTPDPTSSSPAA
TTSAPPDPGSDGKPGKPDNHGKRPPAVEPRGFFGWFTE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgttcccgccgatctctccggtaagagcgacgccgagctgatcgcagaggtg
cgcgcgggaaagatcgcgtcctacggtccgctttacgagcggcacagcggtgccgcgcac
aacctcgcccgccagctcgcgcggtccagctccgaggccgacgacctcgtgtcggaggct
ttctcgaaggttctggacacgctgcgtggcgggaagggaccggacaccgcctttcgggcg
tacctgcttaccgcgcttcgtcacaccgcgtatgacaagacgcgccgcgaccgccggatc
gacctcaacgaggacatgagcgacgtcggcggggccgctggcgaagcactcaccgtgccg
ttctccgacaccgccgtcgcgggactcgagcgcacgatggccgcgaaagcgttcgcgcga
ctcccggaacgctggcaggcagtgctgtggcacaccgaaatcgagcagcagagcccggct
gaagtcgcgccgctgctcgggttgaccgcgaacggcgtgtccgcgctcgcgtaccgcgcc
cgggaggggctccggcaggcgtatctgcaggtccacctgcaggaaaccggtgcggaccgc
tgccgggcgacggccgatcggctcggggcctggacgcgcgacgggctgtccaagcgcgag
cgttcgcaagtggagaaccacctcgacgaatgcgagaagtgccgggtgctggcggccgaa
ctggccgacgtcaacggcagcctgcgcgcgatcatcgccccgatcgtcctgggcggcgcg
gctctcggttacctggccacgatcggcgcggccaaggcgagcgcggcgaccgccggggcc
gctgtcggcgctggcgccgccgcggcaggcggggccaaggcgggtgcggcggcagctgcg
tccgcaccgcggcagttcgccggggtcgccatgtcgggggccgcgatggtggccgccgtg
gcggtcgcgctggccgccggcggtgggactcagaccattccggctgctcagcaggccccc
gcacctccgccggccgccgcaccggcacccgcgccgaagcctgcgcctccggctcctccg
gccgcgcctcccgctcccccggcgccgccgcccgcgcagcccgcgcctccggctgccccg
ccgcccgcggctcctccggctgctcccccggctgctccgccggcacagccgcccgcccag
aacccacctgtcaacgcgccgcagttgtccgcgtctctgcccccgaacggggtcgaactc
cagccgggcggcggaccggtcgcgctgccgatcaccgtgcgcaacaacggcaactcggtg
tccgacccggtccaggcgacgctgaacctgccgccgggagtgcgagccgtgcaggcgaac
ggtggtggcgcggtcggcgcgtactccagtgaagccgctgcgcagtccggtccgacgcag
gtcgcgtgcccgggcggcacgggcacggtcacgtgcaagaccggcagcgggttgcagcct
ggccagtcggcggtgctgatgttccgcttgcaggcggacgcggacgcgaagggcggcgag
gtcaagggttcggttactgcgggtacttcgttgaaggtcgacgtcgttgtccgggtgaag
gtcaatcctccgaaggatgccctgacgctggctgcgaaagcacacggagcgatgtggaaa
ttgcagccgctcgtcgaggctgacgtgcagaacaccgggcagaccacgaaacctgtcacg
atcaccttcgatcaccgggcgaccggacaggtcagcttcaagcagttcaagtgcacgtcg
accgattcgagcatgagctgcaccagcgccaaaccgctggcacccggcgaattggcgtcg
ctgtgggtgctggtggaccgcaagccgttcgacggcccactcactgtcaccgtcaacgcg
tcgctcggcgctgcctcggcgcagccggtcgcggtcccgctcggctgctggtggaacatg
tgccacgacccgacgatcggcccgctctccaccacgtccgtgccgctgccgaccacgacg
tcaacctcgaagagccacactccgagttcgacgaagcacccgaagccgagcgtcaccctg
ccgacctcgacgtcgccggacgacgacactccggacccgacgtcgagcagcccggccgcc
accacgagcgcgccgccggaccccggttcggacggcaagcccggcaaacccgataaccac
ggcaaacgtccgccggcggtggaaccccgcgggttcttcggctggttcacggagtag
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