KEGG   Amycolatopsis sp. AA4: CU254_03390
Entry
CU254_03390       CDS       T05278                                 
Name
(GenBank) RNA polymerase subunit sigma
Organism
amyc  Amycolatopsis sp. AA4
SSDB
Motif
Pfam: Sigma70_r2 zf-HC2 Sigma70_r4_2 DUF11
Other DBs
NCBI-ProteinID: ATY09614
UniProt: A0A2K8LMF8
LinkDB
Position
complement(676802..679078)
AA seq 758 aa
MSTVPADLSGKSDAELIAEVRAGKIASYGPLYERHSGAAHNLARQLARSSSEADDLVSEA
FSKVLDTLRGGKGPDTAFRAYLLTALRHTAYDKTRRDRRIDLNEDMSDVGGAAGEALTVP
FSDTAVAGLERTMAAKAFARLPERWQAVLWHTEIEQQSPAEVAPLLGLTANGVSALAYRA
REGLRQAYLQVHLQETGADRCRATADRLGAWTRDGLSKRERSQVENHLDECEKCRVLAAE
LADVNGSLRAIIAPIVLGGAALGYLATIGAAKASAATAGAAVGAGAAAAGGAKAGAAAAA
SAPRQFAGVAMSGAAMVAAVAVALAAGGGTQTIPAAQQAPAPPPAAAPAPAPKPAPPAPP
AAPPAPPAPPPAQPAPPAAPPPAAPPAAPPAAPPAQPPAQNPPVNAPQLSASLPPNGVEL
QPGGGPVALPITVRNNGNSVSDPVQATLNLPPGVRAVQANGGGAVGAYSSEAAAQSGPTQ
VACPGGTGTVTCKTGSGLQPGQSAVLMFRLQADADAKGGEVKGSVTAGTSLKVDVVVRVK
VNPPKDALTLAAKAHGAMWKLQPLVEADVQNTGQTTKPVTITFDHRATGQVSFKQFKCTS
TDSSMSCTSAKPLAPGELASLWVLVDRKPFDGPLTVTVNASLGAASAQPVAVPLGCWWNM
CHDPTIGPLSTTSVPLPTTTSTSKSHTPSSTKHPKPSVTLPTSTSPDDDTPDPTSSSPAA
TTSAPPDPGSDGKPGKPDNHGKRPPAVEPRGFFGWFTE
NT seq 2277 nt   +upstreamnt  +downstreamnt
gtgtccaccgttcccgccgatctctccggtaagagcgacgccgagctgatcgcagaggtg
cgcgcgggaaagatcgcgtcctacggtccgctttacgagcggcacagcggtgccgcgcac
aacctcgcccgccagctcgcgcggtccagctccgaggccgacgacctcgtgtcggaggct
ttctcgaaggttctggacacgctgcgtggcgggaagggaccggacaccgcctttcgggcg
tacctgcttaccgcgcttcgtcacaccgcgtatgacaagacgcgccgcgaccgccggatc
gacctcaacgaggacatgagcgacgtcggcggggccgctggcgaagcactcaccgtgccg
ttctccgacaccgccgtcgcgggactcgagcgcacgatggccgcgaaagcgttcgcgcga
ctcccggaacgctggcaggcagtgctgtggcacaccgaaatcgagcagcagagcccggct
gaagtcgcgccgctgctcgggttgaccgcgaacggcgtgtccgcgctcgcgtaccgcgcc
cgggaggggctccggcaggcgtatctgcaggtccacctgcaggaaaccggtgcggaccgc
tgccgggcgacggccgatcggctcggggcctggacgcgcgacgggctgtccaagcgcgag
cgttcgcaagtggagaaccacctcgacgaatgcgagaagtgccgggtgctggcggccgaa
ctggccgacgtcaacggcagcctgcgcgcgatcatcgccccgatcgtcctgggcggcgcg
gctctcggttacctggccacgatcggcgcggccaaggcgagcgcggcgaccgccggggcc
gctgtcggcgctggcgccgccgcggcaggcggggccaaggcgggtgcggcggcagctgcg
tccgcaccgcggcagttcgccggggtcgccatgtcgggggccgcgatggtggccgccgtg
gcggtcgcgctggccgccggcggtgggactcagaccattccggctgctcagcaggccccc
gcacctccgccggccgccgcaccggcacccgcgccgaagcctgcgcctccggctcctccg
gccgcgcctcccgctcccccggcgccgccgcccgcgcagcccgcgcctccggctgccccg
ccgcccgcggctcctccggctgctcccccggctgctccgccggcacagccgcccgcccag
aacccacctgtcaacgcgccgcagttgtccgcgtctctgcccccgaacggggtcgaactc
cagccgggcggcggaccggtcgcgctgccgatcaccgtgcgcaacaacggcaactcggtg
tccgacccggtccaggcgacgctgaacctgccgccgggagtgcgagccgtgcaggcgaac
ggtggtggcgcggtcggcgcgtactccagtgaagccgctgcgcagtccggtccgacgcag
gtcgcgtgcccgggcggcacgggcacggtcacgtgcaagaccggcagcgggttgcagcct
ggccagtcggcggtgctgatgttccgcttgcaggcggacgcggacgcgaagggcggcgag
gtcaagggttcggttactgcgggtacttcgttgaaggtcgacgtcgttgtccgggtgaag
gtcaatcctccgaaggatgccctgacgctggctgcgaaagcacacggagcgatgtggaaa
ttgcagccgctcgtcgaggctgacgtgcagaacaccgggcagaccacgaaacctgtcacg
atcaccttcgatcaccgggcgaccggacaggtcagcttcaagcagttcaagtgcacgtcg
accgattcgagcatgagctgcaccagcgccaaaccgctggcacccggcgaattggcgtcg
ctgtgggtgctggtggaccgcaagccgttcgacggcccactcactgtcaccgtcaacgcg
tcgctcggcgctgcctcggcgcagccggtcgcggtcccgctcggctgctggtggaacatg
tgccacgacccgacgatcggcccgctctccaccacgtccgtgccgctgccgaccacgacg
tcaacctcgaagagccacactccgagttcgacgaagcacccgaagccgagcgtcaccctg
ccgacctcgacgtcgccggacgacgacactccggacccgacgtcgagcagcccggccgcc
accacgagcgcgccgccggaccccggttcggacggcaagcccggcaaacccgataaccac
ggcaaacgtccgccggcggtggaaccccgcgggttcttcggctggttcacggagtag

DBGET integrated database retrieval system