Amycolatopsis sp. AA4: CU254_04385
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Entry
CU254_04385 CDS
T05278
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CU254_04385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyc02000
]
CU254_04385
Transporters [BR:
amyc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CU254_04385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Phosphonate-bd
NPA
Motif
Other DBs
NCBI-ProteinID:
ATY09786
LinkDB
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Position
882940..884148
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AA seq
402 aa
AA seq
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MKNRKTLLAGLCGVSLLLAACGTSGSDSKAGSAPGAQGFTPPKLNALTQLGQPEGQLNVL
AWPGYAENGQNDAKVNWVTPFEQQTGCKVNVKPFGTSDEAVTLMKTGQYDVVSASGDASL
RLVASGDVEPVNTALVPNYNDIYPFLKNKSWNSVNNVAYGIPHGWGANVLAYRTDKVQPE
PTSWSPMFDEKSQFKGKVIAYDSPIYIADAALYLMAHQPDLGIKNPYALDDKQFKAATDL
LKKQRPLVEEYWSDYLKETQSLKSGDGVIGTAWQVTVNLAKSEGAPVAATVPSEGATGWS
DTWMVSAKSQHKTCAYKWMDYITSPKVNAQVAEYFGEAPANSKACAEFKDKSLCDTYHAN
DAAYAAKIQYWTTPIPQCLDGRTDVKCKDYGDWTRAWTEIKG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaggaagacgctgctcgcagggctgtgcggcgtgagcctcctgctcgccgcc
tgcggcacctcgggctccgactccaaggcggggtcggcgccgggcgcgcagggcttcacg
ccgccgaagctgaacgcgctgacgcagctcggacagccggaaggccagctgaacgtgctg
gcgtggcccggatacgcggaaaacggccagaacgacgcgaaggtcaactgggtcacgccg
ttcgagcagcagaccggctgcaaggtcaacgtcaagccgttcggcacctcggacgaggcc
gtgacgctgatgaagaccgggcagtacgacgtggtttccgcgtccggcgacgcctcgctg
cggctggtcgcctcgggcgacgtcgagccggtcaacaccgcgctggtcccgaactacaac
gacatctacccgttcctcaagaacaagtcgtggaacagcgtcaacaacgtcgcctacggc
atcccgcacggctggggcgcgaacgtcctggcctaccgcaccgacaaggtgcagccggag
ccgacgtcgtggtcgccgatgttcgacgagaagtcgcagttcaagggcaaggtcatcgcg
tacgactcgccgatctacatcgccgacgccgcgctgtacctgatggcgcaccagccggat
ctcggcatcaagaacccgtacgccttggacgacaagcagttcaaggcggccacggacctg
ctgaagaagcagcgcccgctggtcgaggagtactggtcggactacctcaaggaaacgcag
tcgctcaagagcggcgacggcgtgatcggcacggcctggcaggtgacggtgaacctcgcg
aagagcgagggcgcgccggtcgcggccacggtgccgagcgagggtgcgaccggctggtcg
gacacctggatggtgtccgcgaagtcgcagcacaagacgtgtgcgtacaagtggatggac
tacatcacgagcccgaaggtgaacgcccaggtcgccgagtacttcggcgaggccccggcg
aactccaaggcctgtgcggagttcaaggacaagtcgctgtgcgacacctaccacgccaac
gacgccgcgtacgccgcgaagatccagtactggaccacgccgatcccgcagtgccttgac
ggccgcacggacgtcaagtgcaaggactacggcgactggacccgggcctggaccgagatc
aagggctga
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