Amycolatopsis sp. AA4: CU254_07010
Help
Entry
CU254_07010 CDS
T05278
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_07010
03036 Chromosome and associated proteins [BR:
amyc03036
]
CU254_07010
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_07010
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CU254_07010
Chromosome and associated proteins [BR:
amyc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CU254_07010
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CU254_07010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ATY10234
LinkDB
All DBs
Position
complement(1462945..1463568)
Genome browser
AA seq
207 aa
AA seq
DB search
MANKAQLIEALSERIGDKKAAAEAVDGLVDIIIRTVHKGEKVTITGFGVFEKRARAARTA
RNPRTGEAVRVKKTNVPAFRAGTTFKDVISGTKKLPKATAVKRATASTAKATATRATATT
TTRAKATAAKPAATRTRATAAKAPAKAAAAKATTTRAKATATKATAAKAAPKATTTRAKA
AAKPAAKKTTAAAKKAPAKRTSAAKKK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaagctctgtcggagcgcatcggcgacaagaaggca
gccgcggaagccgtcgacggtctcgtcgacatcatcatccgcaccgtccacaagggcgaa
aaggtcaccatcaccggcttcggcgtcttcgaaaagcgcgctcgtgccgcccgcaccgcg
cgcaacccgcgcaccggcgaagccgtgcgggtcaagaagaccaacgttccggcgttccgc
gcgggcaccacgttcaaggacgtcatctccggcaccaagaagctgccgaaggcgactgcc
gtgaagcgggcgaccgccagcaccgcgaaggcgaccgccacccgcgccacggcgacgacc
accactcgcgccaaggccaccgccgccaagccggccgccacccgcacccgcgccaccgcg
gccaaggctcccgccaaggccgccgccgcgaaggccaccaccacccgcgccaaggcgacc
gccaccaaggccaccgcggccaaggcggctccgaaggccaccaccacgcgggcgaaggcc
gccgccaagccggccgccaagaagaccacggcggccgcgaagaaggctccggccaagcgc
acctcggccgcgaagaagaagtaa
DBGET
integrated database retrieval system
