Amycolatopsis sp. AA4: CU254_07555
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Entry
CU254_07555 CDS
T05278
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc00362
Benzoate degradation
amyc00624
Polycyclic aromatic hydrocarbon degradation
amyc01100
Metabolic pathways
amyc01120
Microbial metabolism in diverse environments
amyc01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CU254_07555
00624 Polycyclic aromatic hydrocarbon degradation
CU254_07555
Enzymes [BR:
amyc01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
CU254_07555
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ATY10330
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Position
1584498..1585232
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AA seq
244 aa
AA seq
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MATPTERRLPQYRPDPDGTHAPLDYAPYRSTALRHPKQPLVLLPQMLTEVTGPLLGPGRL
GEFDNDLTRQHAGEPQGQRIIVTGRLLDGDGRPIRNSLVEIWQANAGGRYRHTGDRWPSP
LDPNFDGLGRTLTDDDGRYEFTTIKPGAYPWKNHDNAWRPAHIHFSVFGSAFTQRLVTQM
YFPDDPLFSQDPIFNSIPDEKARQRMISRFDLERTEEQWALAFQFDIVVRGREQSVFEDE
EEDE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtggccacaccgaccgagcggcgcctgccgcagtaccggcctgatccggacggcacccac
gcgccgctcgactacgcgccgtaccgctccaccgcgctgcggcatccgaagcagccgttg
gtcctgctgccgcagatgctcaccgaggtcaccggtccgctgctcgggccgggacggctc
ggcgagttcgacaacgacctcacgcgccagcacgcgggcgagccgcagggccagcggatc
atcgtcaccggcaggcttctcgacggcgacgggcggccgatccgcaactcgctcgtcgag
atctggcaggccaacgcgggcggccgctaccggcacaccggcgaccgctggccgtccccg
ctcgacccgaacttcgacgggctcggccgcacgctgaccgacgacgacgggcgctacgag
ttcaccaccatcaagcccggcgcctacccgtggaagaaccacgacaacgcctggcgtccc
gcgcacatccacttctcggtgttcggttcggcgttcacccagcggctcgtcacccagatg
tacttcccggacgacccgctgttctcgcaggacccgatcttcaactccatcccggacgag
aaggcgcggcagcggatgatctcccggttcgacctcgagcgcaccgaggagcaatgggcg
ctggcgttccagttcgacatcgtggtgcgcgggcgcgaacagtcggtgttcgaggacgag
gaggaggacgagtga
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