KEGG   Amycolatopsis sp. AA4: CU254_07945
Entry
CU254_07945       CDS       T05278                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
amyc  Amycolatopsis sp. AA4
Pathway
amyc02024  Quorum sensing
amyc03060  Protein export
amyc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amyc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CU254_07945
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CU254_07945
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CU254_07945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amyc02044]
    CU254_07945
Enzymes [BR:amyc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CU254_07945
Secretion system [BR:amyc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CU254_07945
  Eukaryotic Sec-SRP protein
   CU254_07945
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW AAA_22 nSTAND3 TctA ArsA_ATPase APS_kinase AAA_31 nSTAND_NTPase7 Zeta_toxin MMR_HSR1 AAA_24 NTPase_1 MeaB AAA_26 AAA_17 AAA_30 NPHP3_N AAA_18 AAA_33 ParA Thymidylate_kin NACHT MobB TetR_C_7 TsaE AAA_16 AAA ABC_tran 6PF2K
Other DBs
NCBI-ProteinID: ATY10396
UniProt: A0A2K8LPR4
LinkDB
Position
1666404..1667942
AA seq 512 aa
MFDTLSDRLTSALQSLSRKGRLSDADIDATAREIRIALLEADVALPVVKAFIAKIKDRAK
GAEVSQALNPAQQVVKIVNEELVGILGGETRRLNLAKNPPSVIMLAGLQGAGKTTLAGKL
AMWLKKQGHAPMLVACDLQRPNAVNQLQIVGERAGVTTFAPEPGNGVGDPVDVARRAIEE
AKHAQYDIVVVDTAGRLGVDEELMKQAADIREAVQPDEVLFVVDAMIGQDAVTTAEAFRD
GVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDTFHPDRMASRILGMG
DVLTLIEQAEQHFDQEQAEQAAQKLTSGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAAVDDKQLDRLQAIIRGMTPAERADPKIINGSRRLRIANGSGVTVREVNDLVNRF
FEARKMMAQMAGRFGFGGGGGSKNRKGKKGKKGKKGPTQPRMRGGLPGGMPMLPPGGGMP
GGMPDLSQLGGMNDVPGFDPSKFKLPKDPKNN
NT seq 1539 nt   +upstreamnt  +downstreamnt
gtgttcgacaccctctccgatcggctcacctcggccctgcagtcgctctcgcgcaagggc
cggctgtccgacgccgacatcgacgccaccgcgcgcgagatccgcatcgcgctgctggaa
gcggacgtcgcgctcccagtggtcaaggcgttcatcgcgaagatcaaggaccgggcgaag
ggcgccgaggtctcccaggcgctgaacccggcgcagcaggtcgtcaagatcgtcaacgag
gagctcgtcggcatcctcggcggcgagacgcggcggctcaacctggcgaagaacccgccg
tcggtgatcatgctcgccggtctccagggcgcgggcaagacgacgctggcgggcaagctg
gcgatgtggctgaagaagcagggccacgcgccgatgctggtcgcctgcgacctccagcgg
ccgaacgcggtcaaccagctgcagatcgtcggcgagcgcgcgggcgtcaccaccttcgcg
ccggagccgggcaacggcgtcggcgacccggtcgacgtcgcccgccgcgcgatcgaagag
gccaagcacgcgcagtacgacatcgtcgtggtcgacaccgcgggccgcctgggtgtcgac
gaagagctaatgaagcaggccgcggacattcgtgaggccgtgcagccggacgaagtcctg
ttcgtggtcgacgcgatgatcggtcaggacgcggtcaccacggccgaggcgttccgcgac
ggcgtcggcttcaccggcgtggtgctcacgaagctcgacggcgacgcccgcggtggcgcc
gcgctgtccgtgcgcgaggtcaccggccagccgatcctcttcgcgtccaacggcgaaaag
ctcgaggacttcgacacgttccacccggaccggatggcctcgcgcatcctgggcatgggc
gacgtgctgaccctgatcgagcaggccgaacagcacttcgaccaggagcaggccgaacag
gccgcgcagaagctcaccagcgggcagctcacgctggaggacttcctcgagcagatgctc
gccgtgcgcaagatgggcccgatcggcaacctgctcggcatgctgcccggcgcgggccag
atgaaagaccagctcgccgcggtcgacgacaagcagctggaccggctccaggcgatcatc
cgcggcatgacgcccgccgagcgcgccgacccgaagatcatcaacggctcgcgccggctg
cgcatcgcgaacggctccggcgtgaccgtccgcgaggtcaacgacctggtcaaccgcttc
ttcgaggcgcgcaagatgatggcgcagatggccggccggttcggcttcggcggaggcggc
gggagcaagaaccgcaagggcaagaaggggaagaagggcaagaagggccccacgcagccg
aggatgcgcggcgggctgcccggcggcatgccgatgctgccccccggcggcgggatgccc
ggcgggatgccggacctgtcccagctcggcggcatgaacgacgtgcccggcttcgacccg
tccaagttcaagctgccgaaggacccgaagaacaattga

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