Amycolatopsis sp. AA4: CU254_08035
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Entry
CU254_08035 CDS
T05278
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc02020
Two-component system
amyc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CU254_08035
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CU254_08035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyc03021
]
CU254_08035
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
amyc02035
]
CU254_08035
Transcription machinery [BR:
amyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CU254_08035
Bacterial motility proteins [BR:
amyc02035
]
Flagellar system
Flagellar assembly proteins
Stator
CU254_08035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
Sigma70_ECF
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
ATY10413
LinkDB
All DBs
Position
1681433..1682416
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AA seq
327 aa
AA seq
DB search
MTEHTRGPEEAGGGSAEDGRAEPSAHAHPHEHGDHTDQHAENDRAMTSTSQVTEAGAARP
GVQDAVNGDGRPGQDVDAGIQALWQQFADKPDQTSRDRLVLHYAPLVKYVAGRVGTGLPT
HVDVGDLVQSGIFGLVDAIEKFDPERGLRFETYAMQRIRGAILDDLRSQDWVPRAVRSKA
KETARALERLGARLHRTPTDAELAGEMGISLDDLRDFYGQLRLTSVVALEDLVAAGKDAG
SLVDTLPDDGAVDPVAVLVDQDNRRQLAEAIAQLTDRDKIVVSLYYFESLTLAEIGKVLG
VTESRVSQLHTRAVMRLRAKLMEQPSG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcacacccgcgggcctgaagaggccggcggaggctcggccgaggacggcagg
gccgaaccgtcggcgcacgcgcatccgcacgagcacggagaccacactgatcagcacgcc
gagaacgaccgtgcaatgacttccacgtcgcaggtcacggaagccggggcggcacgcccc
ggcgtgcaggacgccgtcaacggggacggtcgtcctggtcaggacgtcgacgcggggatt
caggcgctgtggcagcagttcgccgacaaaccggaccagacgtcgcgcgaccggctggtc
ctgcactacgccccgttggtgaagtacgtcgcgggccgggtcggcaccggtctgccgacg
cacgtagacgtcggcgacctcgtgcaatcgggcattttcgggctggtcgacgcgatcgag
aagttcgacccggaacgcggcctgcgcttcgagacgtacgcgatgcaacgcatccgaggc
gccatcctggacgacctgcgctcccaggactgggtcccgcgcgcggtgcgcagcaaggcg
aaggaaacggcccgcgccctggaacgcctgggcgcccgcctgcaccgaaccccgaccgac
gccgagctggccggcgaaatgggcatcagcctcgacgacctgcgcgacttctacggccag
ctccgcctgaccagcgtcgtggccctcgaagaccttgtcgccgcgggcaaagacgcgggc
tcgctggtcgacaccctccccgacgacggcgcggtcgacccggtggccgtcctggtggac
caggacaaccgccgccagctcgccgaagccatcgcgcagttgaccgaccgggacaagatc
gtcgtcagcctctactacttcgaaagcctgaccctggcggagatcggcaaagtcctgggc
gtcacggagtcccgcgtgagccagctccacacccgcgcggtgatgcgcctgcgcgccaag
ttgatggaacaacccagcggctga
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