KEGG   Amycolatopsis sp. AA4: CU254_08775
Entry
CU254_08775       CDS       T05278                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
amyc  Amycolatopsis sp. AA4
Pathway
amyc00010  Glycolysis / Gluconeogenesis
amyc00020  Citrate cycle (TCA cycle)
amyc00260  Glycine, serine and threonine metabolism
amyc00280  Valine, leucine and isoleucine degradation
amyc00310  Lysine degradation
amyc00380  Tryptophan metabolism
amyc00620  Pyruvate metabolism
amyc00630  Glyoxylate and dicarboxylate metabolism
amyc00640  Propanoate metabolism
amyc00670  One carbon pool by folate
amyc00785  Lipoic acid metabolism
amyc01100  Metabolic pathways
amyc01110  Biosynthesis of secondary metabolites
amyc01120  Microbial metabolism in diverse environments
amyc01200  Carbon metabolism
amyc01210  2-Oxocarboxylic acid metabolism
amyc01240  Biosynthesis of cofactors
Module
amyc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
amyc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amyc_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
amyc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
amyc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:amyc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CU254_08775 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CU254_08775 (lpdA)
   00620 Pyruvate metabolism
    CU254_08775 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CU254_08775 (lpdA)
   00640 Propanoate metabolism
    CU254_08775 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CU254_08775 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CU254_08775 (lpdA)
   00310 Lysine degradation
    CU254_08775 (lpdA)
   00380 Tryptophan metabolism
    CU254_08775 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CU254_08775 (lpdA)
   00670 One carbon pool by folate
    CU254_08775 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amyc04147]
    CU254_08775 (lpdA)
Enzymes [BR:amyc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CU254_08775 (lpdA)
Exosome [BR:amyc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CU254_08775 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like DAO GIDA AlaDh_PNT_C FAD_oxidored NAD_binding_8 3HCDH_N FAD_binding_2 Thi4 2-Hacid_dh_C Lycopene_cycl Amino_oxidase Trp_halogenase FAD_binding_3
Other DBs
NCBI-ProteinID: ATY10542
UniProt: A0A2K8LQ31
LinkDB
Position
complement(1834666..1836039)
AA seq 457 aa
MSDTSADLVILGGGSGGYAAAFRAAELGLSVTLIEKDKLGGTCLHRGCIPTKALLHAAEV
ADEARDAETFGVKAVFEGIDIAGVNKYKDGIVSRLYKGLQGLAKAHKVNLVEGTGRFVGG
TTVEVDGTRYTGKNVILATGSYSRTLPGLELGGRIIASEQALTLDYVPKKVVVLGGGVIG
VEFASVWASFGVDVTVVEALPRLVPNEDEYASKQLERAFRRRKIAFKTGVKFTGAKQDDN
GVSVSLESGETLEADLLLVAVGRGPNSAGHGYEEAGVKIDRGFVLTDDRLRTNLPNVYAV
GDIVPGLQLAHRGFQQGIFVAEEIAGLNPRAIDERGIPRVTYSHPEVASVGLTETQAKEK
YGSDVTTFTYDLGGNGKSQILKTSGGVKLVKAPDGPVVGVHMVGDRVGELIGEAQLIYSW
EAFPEDVAPLIHAHPTQTEALGEAFLALAGKPLHVHS
NT seq 1374 nt   +upstreamnt  +downstreamnt
gtgagcgacacctccgccgacctcgtgatcctgggaggcggatcgggcggctacgccgcg
gccttccgcgctgccgagctgggcctttccgtcacgctgatcgagaaggacaagctgggc
gggacctgcctccaccggggctgcatcccgaccaaggccctgctgcacgccgccgaggtc
gccgacgaggcccgcgacgccgagaccttcggcgtcaaggccgtgttcgagggcatcgac
atcgcgggggtgaacaagtacaaggacggcatcgtctcccggctgtacaagggcctccag
ggcctggccaaggcgcacaaggtgaacctcgtcgagggcaccggccggttcgtcggcggc
acgaccgtcgaggtcgacggcacgcgctacaccggcaagaacgtcatcctcgccaccggt
tcgtactcgcgcaccctgcccggcctcgagctcggcggccgcatcatcgcgagcgagcag
gcgctgacgctggactacgtgccgaagaaggtcgtcgtgctcggcggcggcgtgatcggc
gtggagttcgccagcgtgtgggcttccttcggggtcgacgtcaccgtggtcgaggcgctc
ccgcggctggtcccgaacgaggacgagtacgcctccaagcagctcgagcgggcgttccgc
cggcgcaagatcgccttcaagaccggcgtgaagttcaccggcgcgaagcaggacgacaac
ggcgtcagcgtgtcgctggagtccggcgagacgctggaggccgacctgctgctggtcgcc
gtcggccgcggcccgaactcggccgggcacggctacgaggaggcgggcgtcaagatcgac
cgcggcttcgtgctcaccgacgaccggctgcgcaccaacctgccgaacgtgtacgcggtc
ggcgacatcgtgccgggccttcagctcgcgcaccgcggcttccagcagggcatcttcgtg
gccgaggagatcgccggactgaacccgcgcgccatcgacgagcgcggcatcccgcgcgtc
acctactcgcaccccgaggtcgcctcggtcgggctcaccgagacccaggccaaggagaag
tacggctcggacgtcaccacgttcacctacgacctcggcggcaacggcaagagccagatc
ctcaagacctccggcggcgtgaagctggtgaaggcgccggacggccccgtcgtcggcgtg
cacatggtcggcgaccgggtcggcgagctgatcggcgaagcgcagctgatctacagctgg
gaggcgttcccggaggacgtcgccccgctgatccacgcgcaccccacgcagaccgaggca
ctcggcgaagcgttcctcgccctcgcgggcaagccgctgcacgtgcacagctga

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