Amycolatopsis sp. AA4: CU254_11060
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Entry
CU254_11060 CDS
T05278
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyc03016
]
CU254_11060
Enzymes [BR:
amyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CU254_11060
Transfer RNA biogenesis [BR:
amyc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CU254_11060
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATY10950
UniProt:
A0A2K8LVB5
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All DBs
Position
complement(2316965..2318227)
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AA seq
420 aa
AA seq
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MGTAQADGARTGDETTEDSGTPVLLREPAEGTPPVVADPDALAEACARLAAGTGAVAVDT
ERASGYRYWPKAYLVQLRREGSGTVLIDPIALADDLAPLRDVLNDTEWVLHAASQDLPCL
AELNLRPRSLFDTELAGRLAGYERVALGTLVELLLGYTLEKGHSAADWSKRPLPVDWLNY
AALDVELLNELREKLEAELTAQGKLEWARQEFEAVRTAPPPAPRAEPWRRTSGVHKIRSP
RGLAAVREMWQARDELARKRDRAPSRILPDSAIVNAVTSDPKTVEELQALPVFSGRVQRK
YTASWLRHLQAAKALPASELPSPSQPSDGPPPVNRWADKDPDAAARLAAARAALAAIAED
RKLPVENLLLPDLVRRTCWRPPADLSEDSVAEALKAGGARPWQIELTAAVLSKALQSTAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgcacaggcggacggagcgcggaccggagacgagaccaccgaagactccgga
acgccggtgctgctccgcgaaccggcggaaggcacccctccggtggtggccgaccccgac
gcgctcgccgaggcgtgcgcgcggctcgccgcgggcacgggcgccgtcgccgtcgacacc
gaacgggcgtcgggttatcgctactggcccaaggcctatctcgtccagctgcgccgcgaa
ggctccggcacggtgctgatcgaccctatcgcgctcgccgacgacctcgccccgctgcgg
gacgtcctcaacgacaccgaatgggtgctgcacgccgcgtcccaggatctgccgtgcctg
gcggaactgaacctgcgcccgcgctcgctgttcgacaccgaactggccggacggctggcc
ggatacgaacgcgtcgcgctgggcacgctcgtcgagctgctgctcgggtacacgctcgag
aaggggcacagcgccgctgactggtcgaagcgcccgctgccggtcgactggctcaactac
gccgcgctcgacgtcgagctgctcaacgagctgcgcgagaaactcgaggccgagctgacg
gcgcagggcaagctggagtgggcgcggcaggagttcgaggcggtccgcaccgctcccccg
cccgcgccgcgcgccgaaccgtggcgccgaacgtccggggtgcacaagatccgcagcccg
cgcggcctcgccgcggtccgggagatgtggcaggcccgcgacgagctggcccgcaaacgc
gaccgcgcgccgagccggatcctgcccgacagcgcgatcgtcaacgcggtcacctccgac
ccgaagacggtcgaggaactgcaggcgcttccggtgttcagcggacgcgtgcagcgcaag
tacacggccagctggctgcggcacctgcaggcggccaaagcgctgccggcgagcgagctg
ccgagcccgagccagccgtccgacggtccgccgccggtcaaccggtgggccgacaaggac
ccggacgccgctgcccggctcgccgccgcgcgggccgccttggccgcgatcgcggaggac
cgcaagcttccggtggagaacctgctgctgccggacctggtccggcgcacctgctggcgt
cccccggccgacctctcggaggactcggtcgcggaagcgctgaaggcgggtggagcgcgg
ccgtggcagatcgagctgaccgcggcggtgctgagcaaggcgttgcagagcacggcttcc
tga
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