Amycolatopsis sp. AA4: CU254_11495
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Entry
CU254_11495 CDS
T05278
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc00220
Arginine biosynthesis
amyc00240
Pyrimidine metabolism
amyc00250
Alanine, aspartate and glutamate metabolism
amyc01100
Metabolic pathways
amyc01110
Biosynthesis of secondary metabolites
amyc01240
Biosynthesis of cofactors
Module
amyc_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CU254_11495 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CU254_11495 (carB)
00220 Arginine biosynthesis
CU254_11495 (carB)
Enzymes [BR:
amyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CU254_11495 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_2
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_3
GARS_A
ATP-grasp_4
RimK
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ATY11024
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Position
2405791..2409108
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AA seq
1105 aa
AA seq
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MPKRTDIQHVLVIGSGPIVIGQAAEFDYSGTQACRVLRSEGLRVSLVNSNPATIMTDPEF
ADATYIEPVTPDFVEKVIAAERPDALLATLGGQTALNCAVALHERGVLEKYGVELIGADI
DAIQRGEDRQKFKDIVRKIGADVPRSRVCHNMDEVRETVAELGLPVVIRPSFTMGGLGSG
MAHTPEDLERLASTGLTESPVTEVLIEESVLGWKEYELELMRDKHDNVVVVCSIENVDAM
GVHTGDSVTVAPTMTLTDREYQVMRDVGIAVLREVGVDTGGCNIQFAFNPVDGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIRNDITGETPASFEPALDYVVVKVPR
FAFEKFPGADPTLTTTMKSVGEAMSFGRSFPEALGKAMRSIETKATGFWTLPDPEGATVE
STLDSLRTPHEGRLYEVELALRLGATVEQVHEASGIDPWFIDQIALIGEVGAEVRDAPVL
DGDLLRRAKRTGLSDRQIAALRPELAGEDGVRALRHRLGVRPVFKTVDTCAAEFAAKTPY
HYSAYETDPAATSEVAVQSDKPKVLILGSGPNRIGQGIEFDYSCVHAAIALREAGFEAVM
VNCNPETVSTDYDTSDRLYFEPLSFEDVLEVVHAEQQSGTVAGVIVQLGGQTPLGLAQRL
ADAGVPVVGTPPEAIDLAEDRGAFGEVLSEAGLPAPKYGTATSFEGAKRIADEIGYPVLV
RPSYVLGGRGMEIVYDEESLAGYIRRATEVTPEHPVLVDRFLDDAIEIDVDALFDGEDLY
LGGVMEHIEEAGIHSGDSSCALPPITLGAQDLDAVRRSTEAIARGVGVRGLLNVQYALKD
DVLYVLEANPRASRTVPFVSKATAVPLAKAAALVMTGSTIKDLRASGVLPAEGDGGRMPA
DSPVAVKEAVLPFHRFRTPEGHGVDSLLGPEMKSTGEVMGVDTSFGKAFAKSQSGAYGSL
PTSGRVFVSVANRDKRSLVFPVKRLADLGFEILATSGTAEVLRRNGVACSVVRKHSEPDP
GTGEPNIVDVILAGDVNMVINTPYGNSGPRVDGYEIRTAAVSRDIPCITTVQGAAAAVHG
IEALIRGDIGVRSLQDLQAALKATS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaggacggacatccagcacgtgctggtgatcggctccgggccgatcgtgatc
gggcaggcggccgagttcgactactcgggcacgcaggcctgccgggtgctgcgcagcgag
ggtctgcgcgtgtcactggtgaactcgaatccggcgacgatcatgacggatccggagttc
gccgacgcgacctacatcgagccggtgacgccggacttcgtggagaaggtcatcgcggcc
gagcgccccgacgcgctgctggcgacgctcggcgggcagaccgcgctgaactgcgcggtg
gcgctgcacgagcgcggcgtgctggagaagtacggcgtggagctgatcggcgcggacatc
gacgcgatccagcgcggcgaggaccggcagaagttcaaggacatcgtccgcaagatcggt
gcggacgtgccgcgcagccgggtgtgccacaacatggacgaggtccgcgagacggtcgcg
gaactgggcctgccggtcgtcatccggccgtcgttcacgatgggcggcctcggctcgggc
atggcgcacacgccggaggacctggagcggctggcctcgaccgggctcaccgagtccccg
gtgaccgaggtgctgatcgaggagagcgtgctcggctggaaggagtacgagctcgagctg
atgcgcgacaagcacgacaacgtcgtggtcgtgtgctcgatcgagaacgtggacgcgatg
ggcgtgcacaccggcgactcggtcaccgtcgcgccgacgatgaccctgaccgaccgcgag
taccaggtgatgcgcgacgtcggcatcgccgtgctgcgcgaggtcggcgtggacaccggt
ggctgcaacatccagttcgcgttcaacccggtcgacggccggatggtcgtgatcgagatg
aacccgcgcgtgtcccgttccagcgccctggcgtcgaaggcgaccggtttcccgatcgcg
aagatcgcggcgaagctggcgatcggctacacgctcgacgagatccgcaacgacatcacc
ggcgagaccccggcctcgttcgagcccgcgctcgactacgtcgtggtgaaggtgccgcgg
ttcgcgttcgagaagttccccggtgcggacccgacgctgaccacgaccatgaagtcggtc
ggcgaggcgatgtcgttcggccgcagtttccccgaagcgctcgggaaggcgatgcggtcg
atcgagaccaaggcgaccgggttctggacgctgcccgaccccgagggcgcgacggtcgag
tccactttggactcgctgcgcacgccgcacgaaggccgcctctacgaggtggaactggcg
ctgcggctgggcgcgacggtcgagcaggtgcatgaggcgagcgggatcgacccgtggttc
atcgaccagatcgcgctgatcggcgaggtcggcgcggaggtccgcgacgccccggtgctc
gacggcgacctgctgcggcgggcgaagcgcaccggcctgtccgaccgccagatcgccgcg
ctgcgcccggaactcgcgggcgaggacggcgtgcgggcgctgcggcaccggctcggcgtg
cggccggtgttcaagacggtcgacacctgcgcggcggagttcgcggcgaagaccccgtac
cactactcggcctacgagaccgacccggcggcgacgtccgaggtcgcggtccagagcgac
aagccgaaggtgctgatcctcgggtccggcccgaaccggatcgggcagggcatcgagttc
gactactcctgcgtgcacgcggcgatcgcgttgcgcgaggccgggttcgaggccgtgatg
gtcaactgcaacccggaaaccgtgtcgaccgactacgacacgagcgaccggctgtacttc
gagccgctgtcgttcgaggacgtgctcgaggtcgtgcacgccgagcagcagtccggcacg
gtggcgggcgtgatcgtgcagctgggcgggcagaccccgctcgggctcgcgcagcggctc
gccgacgccggggtgccggtggtcgggacgccgccggaggcgatcgacctggccgaggac
cgcggcgcgttcggcgaggtgctgtccgaggccgggctgcccgcgccgaagtacggcacg
gcgacctcgttcgagggcgcgaagcggatcgccgacgagatcggctacccggtgctggtc
cgcccgtcctacgtgctgggcgggcgcggcatggagatcgtctacgacgaggagtccctg
gccggctacatccgccgcgccaccgaggtcacgccggagcacccggtgctcgtggaccgg
ttcctcgacgacgcgatcgagatcgacgtggacgccctgttcgacggcgaggacctctac
ctcggcggcgtgatggagcacatcgaggaagccggcatccactccggcgactcctcgtgc
gccctgccgccgatcaccctcggcgcgcaggacctcgacgcggtccgccgctccaccgag
gccatcgcccgcggcgtcggcgtccgcggcctgctgaacgtgcagtacgcgctcaaggac
gacgtgctctacgtcctggaggccaacccgcgtgcctcgcgcacggtcccgttcgtctcc
aaggcgaccgcggtgccgctggcgaaggccgcggcgctggtgatgaccggctccacgatc
aaggatctgcgcgcttccggcgtgctgcccgccgagggcgacggcggccggatgcccgcc
gactcgccggtcgcggtcaaggaagccgtgctcccgttccaccggttccgcacgccggaa
ggacacggcgtcgactccctgctcggcccggaaatgaaatccaccggcgaggtcatgggc
gtcgacacctccttcgggaaagcattcgcgaaatcgcagagcggcgcttacggatccctt
cccacctcgggccgggtattcgtctccgtcgccaaccgcgacaagcgttcgctggtgttc
ccggtgaagcggctggccgatctcggcttcgagatcctggccacgtccggtaccgcggaa
gtgttgcggcgcaacggggttgcctgttcggtggtgcgcaagcactccgagccggacccg
ggcaccggcgagccgaacatcgtcgacgtgatcctcgccggcgacgtcaacatggtgatc
aacacgccgtacggaaacagcggaccgcgcgtggacggttacgaaatccgcactgccgcg
gtgtcgcgcgacattccgtgcatcaccacggtgcagggcgccgcggcggccgtgcacggc
atcgaagcgcttatccgcggcgacatcggcgtgcgcagcctgcaggacctccaggcggcg
ctgaaggcgacgtcgtga
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