Amycolatopsis sp. AA4: CU254_13290
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Entry
CU254_13290 CDS
T05278
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc02010
ABC transporters
amyc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CU254_13290
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CU254_13290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyc02000
]
CU254_13290
Transporters [BR:
amyc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CU254_13290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ATY11328
LinkDB
All DBs
Position
2820987..2821988
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AA seq
333 aa
AA seq
DB search
MSGILRGGAVLAGLALVAACGTTHENAPGASSGTAPAAKQCRGPSGKYKIGMSQANLAEP
YRVRMDGDIRKAAAGVPQFSVSYADAAQDNAKQVEQVNTFLTQGIDLLIISPNEATPLTG
VVKKAYDQGIPVLVLDRKVDGDGYTSFIGADNVDIGRQAGKFVAGKLLPHGGKVVELKGL
AGSTPAKERSDGFNEGITDRNITVVGTADADWLRDKGQQQADALLKAHPDAQAMFSENDP
MAEGARIAAQNAGRADLPIVGIDGLPVPEGGIKAVEAGRLSATFIYPTGGKEAVAAAKKL
LVDCQTVPKTQTLPTRLVTRDNAAQVYAELNRS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcatcctccgcggcggagcagtcttggcggggctggccctcgtcgctgcgtgc
ggcaccacccacgagaacgcgccgggcgcgtcgtcgggcaccgcgccggccgcgaaacaa
tgccgcggtccgagcgggaaatacaaaatcgggatgagccaggcgaatctcgccgaaccg
tatcgcgtgcggatggacggcgacatccgcaaggccgcggccggggtgccgcaattcagc
gtcagttacgcggacgccgcgcaggacaacgcgaaacaggtcgagcaggtcaatactttc
ctgacccaggggatcgacctgctgatcatcagcccgaacgaggcgacgccgctgaccggg
gtcgtgaagaaggcgtacgaccaggggattccggtgctggtgctggaccggaaggtcgac
ggcgacggatacacgtcgttcatcggcgcggacaatgtggacatcggcaggcaggcgggc
aagttcgtcgccgggaaattgctgccgcacggcgggaaagtcgtcgagctgaagggtctc
gccgggtcgactccggccaaggaacgcagcgacggattcaacgagggcatcacggaccgc
aatatcaccgtcgtgggcaccgcggacgcggattggttgcgggacaagggacaacagcag
gcggacgcgttgctgaaggcgcatccggacgcgcaggcgatgttctcggagaacgacccg
atggccgagggcgcgcgcatcgccgcgcagaacgcgggccgcgcggacctgccgatcgtc
ggcatcgacggcctgcccgtgcccgaaggcggcatcaaggcggtggaggccggacggctg
tccgcgacgttcatttatcccaccggcggcaaggaagccgttgcggcggccaagaaactg
ctcgtcgactgccagaccgtgcccaaaacgcagaccttgccgacccgcctggtgacgcgc
gacaacgcggcccaggtctacgccgaactgaaccggagctga
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