Amycolatopsis sp. AA4: CU254_13935
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Entry
CU254_13935 CDS
T05278
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc00906
Carotenoid biosynthesis
amyc01100
Metabolic pathways
amyc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CU254_13935 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amyc01006
]
CU254_13935 (hpnD)
Enzymes [BR:
amyc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
CU254_13935 (hpnD)
Prenyltransferases [BR:
amyc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CU254_13935 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ATY11436
UniProt:
A0A2K8LSR9
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All DBs
Position
complement(2956125..2956994)
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AA seq
289 aa
AA seq
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MTALGTVDEAYAHCAAVTKEQARNFYYGIRLLPPGKRAALCAVYALARIIDDIGDDTAAS
AETKLQGLAGVRKALGDLSSTADPVYVAVADAARRYPIPLGAFEELLDGVEMDVTGREYV
RFEELVEYCRCVAGSVGRLCLGVFGSRPEPNAPVYADELGIALQQTNILRDIREDLLNGR
VYLPKEDLDRFGVELSVGPDGKLADPEGGLAALIHDSATRARDWYARGLRLVPSLDGRSA
ACCTAMSGIYRTLLDRIDEQPARVFDRRLSLSGREKAVVAFRALTGIGR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacggcactgggcacagtggacgaggcctacgcgcactgcgcggcggtcaccaaggaa
caggcgcgcaatttctactatgggatccggttgctgccgccgggcaaacgggcggcgttg
tgcgcggtgtacgcgctggcccggatcatcgacgacatcggcgacgacaccgcggcgtcg
gccgagaccaagctgcagggactcgccggagtgcggaaagcgctcggcgacctgtcctcg
accgccgacccggtgtacgtcgcggtcgccgacgcggcgcgccggtacccgattccgctg
ggcgcgttcgaggaattgctcgacggcgtcgagatggacgtgaccggccgcgagtacgtg
cggttcgaggaactggtcgagtactgccggtgcgtggcgggttcggtcgggcggctgtgc
ctcggcgtgttcggcagccgtccggagccgaacgcgccggtgtacgccgacgagctggga
atcgccttgcagcagaccaatatcctgcgcgacatccgcgaggatctgctcaacgggcgg
gtgtatctgcccaaagaggacctcgaccggttcggcgtcgaactgtccgtcggcccggac
ggcaagctggccgatcccgaaggcggcctcgccgcgctgatccacgacagcgcgacgcgc
gcccgggactggtacgcccgcgggcttcggctggtgccctctttggacggtcgcagcgcc
gcgtgctgcaccgcgatgtcgggcatctaccgcaccctgctggaccggatcgacgaacag
cccgcgcgcgtgttcgaccggaggctttcgttgtccggccgggaaaaggcggtggtggcg
ttccgagcgctgaccgggatcggccgatga
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