Amycolatopsis sp. AA4: CU254_18280
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Entry
CU254_18280 CDS
T05278
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
amyc03051
]
CU254_18280 (pafA)
Enzymes [BR:
amyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CU254_18280 (pafA)
Proteasome [BR:
amyc03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CU254_18280 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF5674
Motif
Other DBs
NCBI-ProteinID:
ATY12199
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Position
3912455..3913813
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AA seq
452 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLTQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTMLKIGSANLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALDIQREYHARAVQHLKENGSTPANE
RVVELWGRALEAVEEQDFSKIDTEIDWAIKHRLVERYRAKHDLDLSSPRVAQLDLAYHDI
RRGRGIFDLLQRKGLVRRVTDDGEIEAAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIGSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttggcatcgagaccgagttcggggtcacgtgcacctttcacggc
cagcgcaggctctcgcccgacgaggtcgcgcgctacctcttccggcgggtcgtctcgtgg
ggacgctcgtccaacgtgttcctgtccaacggctccaggctctacctcgacgtgggctcg
cacccggagtacgcgacggccgaatgcgacgacctgacccagctcgtcacgcacgacaag
gccggcgagcggatcctcgaggacctcctcgtggacgccgagcgcaggctcgccgacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctggtgacccgggccggggagttctcccggatcgccgacgtg
ctgctgccgttcctcgtcacccgccagctgatctgcggcgcgggcaaggtcctgcagacc
ccgcgcggcgcggtgtactgcctctcccagcgcgccgagcacatctgggaaggcgtctcc
agcgccaccacccggtcccggccgatcatcaacacccgcgacgaaccccacgccgacgcc
gagcggtaccggcgcctgcacgtcatcgtcggcgactcgaacatggccgagcccaccacg
atgctcaagatcgggtcggcgaacctcgtgctcgagatgatcgaggccggggtccagttc
cgcgacttcacgctcgacaacccgatccgcgcgatccgcgagatcagccacgacctcacc
ggacgccgccaggtccggctcgccggcgggcgcgaggcgtccgcgctggacatccagcgg
gagtaccacgcccgggcggtccagcacctgaaggagaacgggtccacgcccgccaacgag
cgggtcgtggagctgtggggacgcgcgctcgaggcggtcgaggagcaggacttcagcaag
atcgacaccgagatcgactgggcgatcaagcaccgcctggtcgaacggtaccgggccaag
cacgacctggacctgtccagcccgcgcgtggcccagctcgacctcgcctaccacgacatc
cgccgcggccggggcatcttcgacctcctgcagcggaagggcctggtccgccgcgtcacc
gacgacggcgagatcgaggccgccaaggacaccccgccgcagaccacccgcgcgaaactg
cgcggcgacttcatcgcggcggcccaggcagccggacgcgacttcacggtcgactgggtg
cacctgaagctgaacgaccaggcacagcggacagtcctgtgcaaggacccgttccggtcc
gtggacgagcgagtggagcgcctgatcgggtcgctgtaa
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