Amycolatopsis sp. AA4: CU254_18910
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Entry
CU254_18910 CDS
T05278
Symbol
gabD2
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc00250
Alanine, aspartate and glutamate metabolism
amyc00310
Lysine degradation
amyc00350
Tyrosine metabolism
amyc00650
Butanoate metabolism
amyc00760
Nicotinate and nicotinamide metabolism
amyc01100
Metabolic pathways
amyc01120
Microbial metabolism in diverse environments
Module
amyc_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CU254_18910 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CU254_18910 (gabD2)
00310 Lysine degradation
CU254_18910 (gabD2)
00350 Tyrosine metabolism
CU254_18910 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CU254_18910 (gabD2)
Enzymes [BR:
amyc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CU254_18910 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CU254_18910 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CU254_18910 (gabD2)
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Motif
Pfam:
Aldedh
OmdA
Motif
Other DBs
NCBI-ProteinID:
ATY12306
UniProt:
A0A2K8LV84
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All DBs
Position
complement(4053485..4054969)
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AA seq
494 aa
AA seq
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MTITNARRLDTALPASLTQARLERLAALVAAAGAQRVVTTSPYTGAPLADLPVSTPDDVE
EAFARARAAQAGWAATPVADRARILLRFHDLVLQRQEQALDLMQADSGKTRRDAFLEVGD
IAVTARYYARSARRLLSPKRRKGAIPVLTHTTELHHPKGVVTVISPWNYPLSMAAGDAIP
ALLAGNAVVQKPDTQTALTALWAMELMREAGLPADVWQMVIGRGSSIGGALMAGADYLMF
TGSTASGRQIARDAGERLIGASLELGGKNAMVVLADADIEKAAAGAVAACFPSAGQLCVS
VERLYVADEIHDAFVAAFVERTRAMRLGAAYDFSMDMGSLTTPSQLETVSAHVGDAVSKG
ATVLAGGRARPDLGPLFYEPTMVAMANATPYGLNASVWGRNGAEARKVARRLHAGTVNEA
FAAAWGSIDAPMGGMGDSGLGRRHGADGLLKYTEAQTVAHQRLQGFNPPRGIEHEQWARL
LTRAFKMLRALGVR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcacgaacgcgcgccgcctcgacaccgctcttccggcttcgctgacgcaggcc
cggctcgagcgcctggccgccctggtcgccgctgccggagcccagcgggtcgtcacgacc
tcgccctacaccggcgcaccgctcgcggacctgcccgtctccacccccgacgacgtcgag
gaggccttcgcccgggcacgcgctgcccaggccggctgggcggcgaccccggtggccgac
cgcgcgcgcatcctgctgcgcttccacgacctcgtccttcagcggcaagagcaggctcta
gacctgatgcaggccgacagcggcaagacccgtcgcgacgccttcctcgaggtcggcgac
atcgccgtcaccgcccgctactacgcgcgcagcgcacggcggctgctctcgccgaagcgt
cgcaagggcgcgatcccggtgctgacccacaccaccgaactgcaccaccccaagggcgtc
gtcaccgtcatctcgccgtggaactacccgctcagcatggccgccggcgacgccattccg
gccctgctggccggcaacgccgtggtgcagaagcccgacacccagaccgcactgaccgcg
ctgtgggcgatggagctgatgcgcgaggccggattgcccgccgacgtgtggcagatggtg
atcggccgcggcagctccatcggaggcgcgctcatggccggcgcggactacctgatgttc
accggctccaccgccagcgggcgacagatcgcgcgcgacgcgggcgagcggctcatcggc
gcgtcgctggagctgggcggcaagaacgccatggtggtgctcgccgacgccgacatcgag
aaggccgccgccggtgcggtcgccgcctgtttcccctcggccgggcagctgtgcgtgtcc
gtcgagcggctttacgtcgccgacgagatccacgacgcgttcgtggccgcgttcgtcgag
cgcacccgggccatgcgcctgggtgctgcctacgacttctcgatggacatgggctcgctg
accacgccctcgcaactcgagacggtcagcgcacacgtcggcgacgcggtgtcgaaaggc
gcgacggtgctggccggcggccgcgcccgtcccgacctcgggccgctgttctacgagccg
acgatggtggcgatggccaacgccactccgtacggactcaacgcgagcgtctggggccgc
aacggcgccgaggcccgcaaggtggcgcgacggctgcacgccggcaccgtcaacgaggcg
ttcgccgccgcctggggcagcatcgacgcccccatgggcggcatgggcgactcgggcctc
ggccgccggcacggcgccgacggactgctcaagtacaccgaagcccagaccgtcgcccac
cagcggctccagggcttcaacccgccccgcggaatcgagcacgagcagtgggcgcggctc
ctgacccgggcgttcaagatgctgcgcgcactgggcgtccgatga
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