Amycolatopsis sp. AA4: CU254_19115
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Entry
CU254_19115 CDS
T05278
Name
(GenBank) ATP-dependent helicase
Organism
amyc
Amycolatopsis sp. AA4
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
SWI2_SNF2
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
ATY12343
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Position
complement(4093929..4096427)
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AA seq
832 aa
AA seq
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MVEPGRVVFWRPDGAAPDGPGAPGTVEVVLPDGVRTVPALRLPTADAVPVLRAQAAPADP
SARFWALAAEAAERLASAGWTGPLDPAEEAWLRRLADAMPPRAHATPVPSDPARLPEPYP
LLMRFLGDVAGVEPALRVSLRIESDDLAGGRFRAVVQVHGGTEPLVDAEELWRTGSQEAR
HEVLLALRHGAEVWPALAPLLSAAVPSSVALGDREIAELLAGALDAAELAVHWPAELTGL
AARAVVRPGDTPSDARSFFGGDRVLQFDWQLALGDSELSVAELDALAEAQRPVVRLRDRW
VLLDRKTADRARDRTLKPLTAIEALGVALTGRAEVDGDQVEVRTDGWLEELRERLSADPV
PVPQPEGLAATLRDYQLRGLQWLDTVTGLGLGGCLADDMGLGKTVTLIALHLHRGAGPTL
VVCPASLLGTWETEIRRFAPGTPVRRFHGAARSLDGLAGGFVLTTYGTLRTDPAPLAEVS
WDLLVADEAQHVKNHRSDTAKALRLLPSAAKVALTGTPVENTLTELWAILDWTTPGLLGP
LADFRRRWGKPVESGVDPAVAEQLSRLLRPFLLRRRKSDPGIAPELPAKTETDRPVSLTA
EQAALYEATVRELMADIAASDGMARRGRVVKLLAALKQICNHPAQFLGEPADSTLAGRSG
KLELLDELLDTILAEDGAVLVFTQYVVMARLLERHLAARGVPSRLLHGGTPVARREELVC
GFQNGDVPVFLLSLKAAGTGLTLTRADHVVHYDRWWNPAVEDQATDRAYRIGQTRPVQVH
RLVAEGTVEDRIAAMLREKRALADAVLASGEAALTELTDAELAELVTLRRQR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
gtggtggagccgggacgggtcgtgttctggagaccggacggcgcggcgccggacggtccc
ggggcgcccggcacggtcgaggtcgtgctgccggacggcgtgcgcacggtgcccgcgctg
cggttgccgaccgcggacgcggtgccggtgctgcgcgcgcaggcagctccggcggatccg
tcggcacggttttgggcgctggcggccgaagccgcggaacggctcgcctcggccgggtgg
accggaccgctcgacccggccgaggaagcctggctgcgcaggctcgccgacgcgatgccg
ccgcgcgcccacgcgacgccggtcccgagcgatccggcgcggttgccggagccgtatccg
ctgctgatgcgcttcctcggcgacgtcgccggggtggagcccgcgctgcgggtgtcgctg
cggatcgagtccgacgacctggcggggggccggttccgcgcggtcgtccaggtgcacggc
gggaccgagccgttggtcgacgcggaagagctgtggcgcaccgggagccaggaggcgcgg
cacgaggtcctgctggcgctgcggcacggagccgaggtgtggcccgcgctggcgccgctg
ctgtcggcggcggttccgtcgtcggtcgcgttgggcgaccgcgagatcgccgaactgctc
gcgggcgcgctcgacgcggcggagctggcggtgcattggcccgcggagctgaccgggctg
gccgcgcgagcggtggtccggccgggcgacacgccctccgacgcgcggtcgttcttcggc
ggagaccgcgtgctgcagttcgattggcagctcgcgctcggcgacagcgagctgagcgtc
gcggaactcgacgcgctcgccgaggcccagcgtccggtcgtccggctccgggaccggtgg
gtgctgctggaccgcaagacggccgaccgcgcgcgggatcgcacgctcaaaccgctgacc
gcgatcgaagccctcggggtcgcgctgaccggccgcgccgaggtcgacggcgaccaggtg
gaggtccgcaccgacgggtggctggaggaactgcgcgagcggctgtcggccgatcccgtg
ccggtgccgcagccggaggggctggccgcgaccctgcgcgactaccagctgcgcggactg
caatggctcgacaccgtcaccgggctcggcctcggcggctgcctcgccgacgacatgggg
ctcggcaaaaccgtcacgctcatcgcgctgcacctgcaccgcggcgccggcccgacgctg
gtcgtgtgcccggcttcgctgctgggcacgtgggaaacggagatccgccggttcgccccg
gggacgccggtgcgccggttccacggcgccgcgcggtcgctggacggtctcgccggcggt
ttcgtcctgaccacctacggcacgctgcgcaccgatcccgcgccgctggccgaggtgagc
tgggacctgctggtcgccgacgaggcgcagcacgtgaagaaccaccgctccgacacggcg
aaagcgttgcggctgctgccttccgcggcgaaggtcgcgctcaccggcacgccggtggag
aacacgctgaccgaactgtgggcgatcctcgactggaccacgcccggcctgctcggcccg
ctcgccgacttccgccgccgctgggggaagccggtcgaatccggggtcgacccggcggtc
gccgagcagctgtcccggctgctgcggccgttcctgttgcgccgccgcaaatccgacccg
ggcatcgcacccgagctgcccgccaaaaccgagaccgaccggccggtgtcgctcaccgcc
gaacaggccgcgctgtacgaggcgaccgtccgcgagctgatggcggacatcgcggcgagc
gacggcatggcgcggcgcggacgcgtggtcaaactgctcgccgcgctcaaacagatctgc
aaccacccggcgcaattcctcggcgagcccgcggacagcacgctcgccggccggtccggc
aagctggagctgctcgacgaactgctcgacacgatcctcgccgaggacggcgcggtgctg
gtgttcacgcagtacgtggtgatggcgcggctgctcgaacggcacctcgccgcgcgcggc
gtcccgtcgcggctcctgcacggcggcaccccggtcgcccgccgcgaggagctggtctgc
ggcttccagaacggcgacgtgccggtgttcctgttgtcgctcaaggccgcgggcaccggg
ctcaccctcacgcgcgcggatcacgtcgtgcactacgaccggtggtggaacccggcggtc
gaggaccaggcgaccgaccgcgcgtaccggatcggccagacccggccggtgcaggtccac
cggctggtcgcggaaggcacggtcgaggaccggatcgccgcgatgctgcgggagaaacgc
gcgctcgccgacgcggtgctcgcctcgggcgaggccgcgctcaccgaactcaccgacgcc
gaactggccgagctcgtcaccctccggaggcagcgatga
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