Amycolatopsis sp. AA4: CU254_19520
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Entry
CU254_19520 CDS
T05278
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CU254_19520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyc02000
]
CU254_19520
Transporters [BR:
amyc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CU254_19520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MIMI_R596-like_C
Motif
Other DBs
NCBI-ProteinID:
ATY12396
UniProt:
A0A2K8LVH4
LinkDB
All DBs
Position
complement(4189741..4191549)
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AA seq
602 aa
AA seq
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MRRVFGVVTAGTLAILPLPAAPTAQAVQQQGQPKVLRVALTTGIDHLNPFTAGLAASTQV
GRFIYEFLTIPSEDKAEAAPALAESWTTSPDKLTWTFKIRQGAKWSDGQPVTAKDAAFTF
NRMLTDSTARTANGNYVASFESVAAPDDATLVIKTKTVQSSMTLLDVPIVPEHVWSQIKD
LSDPKTDTVPVVGVDDGPYQITEYKQNEYVKFKANKNYWRGAPKVDELQLLVFKDVEAAV
NALKQGEVDVINRLTPTQYDALKGQPNIELNKAPGRRYNALNLNFGVENSENKPIGNGNP
VLKDIRVRQAIAQSVDIKTIVDKVAGGYAQPGGGVIPPIYSAYHWDPAPGEARKFDLAAA
NAALDAAGYPKGQDGVRTAPGGARLELRLTGHANRAQDQRLAQYLTGWLHDIGISVKQEL
VSDDELNDRTNAGNYDLAISGYANNPDPDYSLALHTCAARPNAEGKGGTTDTFFCDPQYD
ALYAKQLAETDPAVRAGYVKQAQARLYSQAVNVVYDYDNVLEAYRSDKFSSFGKQPQPEG
SILEQTAYWGVYGAVPADASAASSDSGSGSTVWIVVGAVVLVVLVGGGVALSRRGKSADD
RE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccgcgttttcggtgtcgtgacggcaggaacgctggcgattctgccgctgccggcc
gcgccgacggcacaggcggtacagcagcaggggcagccgaaggtgctgcgggtcgcgctg
accactggtatcgaccacttgaacccgttcaccgccgggctcgccgcgtcgacccaggtg
ggccggttcatctacgagttcctgacgatcccgtcggaggacaaggccgaggccgcgccg
gcgctcgccgaatcgtggacgacgtcgccggacaagctgacctggacgttcaagatccgc
cagggcgcgaagtggtccgacgggcagccggtcaccgcgaaggacgccgcgttcaccttc
aaccggatgctcaccgactccaccgcgcgcaccgcgaacggcaactacgtcgcgagcttc
gaatcggtggccgcgccggacgacgccacgctggtgatcaagacgaagaccgtgcagtcg
tcgatgaccctgctcgacgtcccgatcgtgcccgaacacgtgtggtctcagatcaaggac
ctcagcgacccgaagaccgacaccgtcccggtcgtcggcgtcgacgacgggccgtaccag
atcaccgagtacaagcagaacgagtacgtcaagttcaaggccaacaagaactactggcgc
ggcgcgcccaaggtcgacgaactgcagctgctggtgttcaaggacgtcgaagccgcggtg
aacgccctcaagcagggcgaggtcgacgtgatcaaccggctcaccccgacccagtacgac
gcgctcaagggccagccgaacatcgagctgaacaaggctcccggccgccgctacaacgcg
ctcaacctcaacttcggcgtcgagaactccgagaacaagccgatcggcaacggcaacccg
gtgctcaaggacatccgggtgcgccaggcgatcgcgcagtcggtcgacatcaagaccatc
gtggacaaggtcgccggcggctacgcccagcccggcggcggcgtgatcccgccgatctac
tcggcctaccactgggatccggctccgggggaggcgcgcaagttcgacctcgccgccgcc
aacgccgcgctcgacgcggccggctacccgaagggccaggacggcgtccgcaccgcgccc
ggcggcgcgcgtctcgaactgcgcctcaccgggcacgcgaaccgcgcacaggaccagcgc
ctcgcgcagtacctcaccggctggctgcacgatatcggcatctcggtgaaacaggaactc
gtctccgacgacgagctgaacgaccgcaccaacgcgggcaactacgacctcgcgatttcc
ggctacgccaacaacccggacccggactactcgctggccctgcacacctgcgccgcgcgg
ccgaacgccgagggcaagggcggcacgaccgacacgttcttctgcgacccgcagtacgac
gcgctctacgccaagcagctcgccgaaaccgacccggccgtccgcgccggctacgtcaag
caggcccaggcgcggctgtactcccaggccgtaaacgtcgtctacgactacgacaacgtg
ctcgaggcctaccgctccgacaagttctcctcgttcggcaagcagccgcagcccgagggt
tcgatcctcgagcagaccgcctactggggcgtgtacggcgcggtcccggccgacgcctcg
gcggcttcttcggacagcggctccggttcgaccgtgtggatcgtcgtcggcgcggtggtg
ctcgtcgtgctcgtgggcggcggcgtcgcgctgtcccgccgcggcaagtccgccgacgac
cgggagtga
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