Amycolatopsis sp. AA4: CU254_21205
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Entry
CU254_21205 CDS
T05278
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyc03021
]
CU254_21205
Transcription machinery [BR:
amyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CU254_21205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_IclR
HTH_24
HTH_23
HTH_31
HTH_Crp_2
HTH_3
Sigma70_ECF
DUF7343
MarR_2
MarR
HTH_AraC
GerE
HTH_37
KORA
HTH_28
HTH_Tnp_4
YidB
Motif
Other DBs
NCBI-ProteinID:
ATY12696
UniProt:
A0A2K8LWD5
LinkDB
All DBs
Position
4553875..4554660
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AA seq
261 aa
AA seq
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MNQQPVTRHRDEYAHTAPLFEELAALPADDPRRPRLRERLVTEFLPVAEHIATRFTGRGE
PREDLVQVARIGLINAIDRFTPDRGPDFLSFAVPTIMGEIRRYFRDTGWSVRVPRRLKEL
HLSLSRGSATLSQTLGRAPTPTELAEHLGLELSEVHEGLVAGHAYQTLSVDKPVHDDAEP
LLLADTLGSDDPEIEHIENHEALQPLLRELPKRERAILVMRFFGGLTQTQIAEQVGISQM
HVSRLLSQTLEQLRDKLTGDP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagcagcccgtcacccgccaccgcgacgaatacgcgcacaccgcgccgctgttc
gaggagctcgccgccctgcccgccgacgacccccggcggccccggctgcgcgagcggctc
gtcaccgaattcctcccggtcgccgagcacatcgccacccggttcaccgggcgcggcgaa
ccccgcgaggatctcgtccaggtcgcccggatcggcctgatcaacgcgatcgaccggttc
accccggaccgcggcccggacttcctgtccttcgccgtgccgacgatcatgggcgagatc
cgccggtacttccgcgacaccggctggtcggtccgcgtgccgcggcggctcaaggaactg
cacctgtcgctcagccgcggttcggccaccctgtcgcagacgctcggccgcgcgccgacg
cccaccgagctcgccgagcacctcggcctcgaactctccgaggtccacgagggcctggtc
gcgggccacgcgtaccagacgctgtcggtggacaagccggtccacgacgacgccgaaccg
ctgctcctggcggacacgctcggcagcgacgacccggagatcgagcacatcgagaaccac
gaggccctgcagccgctgctgcgcgaactgcccaaacgggagcgcgcgatcctcgtgatg
cggttcttcggcggcctcacgcagacccagatcgccgagcaggtcgggatctcgcagatg
cacgtgtcccggctgctgtcgcagactctcgaacagctgcgcgacaagctcaccggcgat
ccctga
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