Amycolatopsis sp. AA4: CU254_21495
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Entry
CU254_21495 CDS
T05278
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CU254_21495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_21495
Enzymes [BR:
amyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CU254_21495
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CU254_21495
RecFOR pathway proteins
CU254_21495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_16
AAA_5
Mg_chelatase
nSTAND3
Resolvase
AAA_3
AAA_14
Sigma54_activ_2
DUF815
RNA_helicase
HTH_AsnC-type
AAA_33
Cdc6_lid
IstB_IS21
Rad17
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-ProteinID:
ATY12742
UniProt:
A0A2K8LWE5
LinkDB
All DBs
Position
complement(4614813..4615901)
Genome browser
AA seq
362 aa
AA seq
DB search
MNHEVTEFDTGGYEAGDETLSALAQTGERDLETSLRPRKLDEFVGQERVREQLELVLESA
RRRDVPPDHVLLSGPPGLGKTSMAMIVAAELGAAIRITSGPALERAGDLAAMLSNLAPGD
VLFIDEIHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGSLT
GPLRDRFGFTGQMEFYSAAELELVVRRAATILGIEIDRDGCAEIAGRSRGTPRIANRLLR
RVRDYAEVRADGKVTLEVAQAALKVYDVDELGLDRLDRAVLGALTRSFGGGPVGISTLAV
AVGEEATTVEEVCEPYLVRAGMLARTPRGRVATAAAWHHLGLVPPPEAGRPDPGGPTLFD
QA
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaagtgaccgagttcgacaccggcgggtacgaggcgggcgacgaaacgctg
tccgcgctcgcccagaccggcgaacgcgacctggaaacgtcgctccggccgcggaaactg
gacgagttcgtcggccaggaacgcgtccgtgagcagctggaactggtgctggagagcgcc
cggcggcgcgacgtgccgccggaccacgtgctgctgtccggcccgcccggcctcggcaag
acgagcatggcgatgatcgtcgcggccgaactgggcgcggccatccggatcacgtccggg
cccgccctggaacgcgccggcgacctggccgcgatgctgtccaacctcgcgcccggcgac
gtgctgttcatcgacgagatccaccgcatcgcccggcccgccgaggaaatgctgtacctc
gcgatggaggacttccgggtcgacgtcgtcgtcggcaagggaccgggcgcgaccagcatc
ccgctcgagatcgcgccgttcacgctggtcggggccaccacccggtccggttcgctgacc
gggccgctgcgcgaccggttcggcttcaccggccagatggagttctactccgcggccgag
ctggagctggtcgtccgccgcgccgcgaccatcctcggcatagagatcgaccgcgacggc
tgcgccgagatcgccggccgttcgcgcggcaccccgcgcatcgccaaccggctgctgcgc
cgggtccgcgactacgccgaggtgcgcgccgacggcaaggtgaccctggaggtcgcgcag
gccgcgctgaaggtctacgacgtcgacgagctgggcctggaccggctcgaccgggccgtg
ctcggcgcgctgacccgctcgttcggcgggggaccggtgggcatctcgacgctcgcggtc
gccgtcggcgaggaggccacgacggtcgaggaggtgtgcgagccctacctggtccgggcc
ggtatgctcgcccgcactccgcgcggccgggtcgcgaccgcggccgcgtggcaccacctc
ggactcgtgccgcccccggaagcgggacggcccgacccgggcggtccgacgctgttcgac
caggcctga
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