Amycolatopsis sp. AA4: CU254_23520
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Entry
CU254_23520 CDS
T05278
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_23520
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_23520
Enzymes [BR:
amyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CU254_23520
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Topoisomerases
CU254_23520
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CU254_23520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ATY13075
UniProt:
A0A2K8M5H9
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All DBs
Position
5075261..5076280
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AA seq
339 aa
AA seq
DB search
MRLRRSELSSPGIKRQRRGRGFRYLAPDGSPVTDPEVLERIQGLVIPPAWRRVWICPHPT
GHIQAVGTDDAGRRQYLYHPEWRRARDEEKHDRVLALAGELPAVRAALQDDLRRRHLDRR
RVAAAALRMIDRGVFRSGGEEYAETNGSHGATTLLREHVKISGDELTFCYPAKSGLVRSL
SLRDGELAAVLKSLRRCRTGTPRLFAYRTDDGWHELHASDVNERFKELAGEEFTVKDFRT
WHATVLAAVSLAAQETPTSQRGRARAESAAMKEVAEELGNTPAVARRSYVDPRVLREFEE
GNTIHRALRKADADGLAEEELRERIEKAVLRLLRRASRG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcggcggagcgagctgtcctcgccgggcatcaagcggcagcggcgaggccgc
ggtttccggtatctcgcgccggacggctctccggtgaccgatccggaggtgctcgagcgc
atccagggtctcgtgatcccgcccgcgtggcgccgggtgtggatctgcccgcatccgacc
gggcacatccaggccgtcgggaccgacgacgcgggccgccgccagtacctctaccacccc
gaatggcggcgagcgcgcgacgaggagaaacacgaccgggtgctcgccctggccggcgaa
ctgcccgccgtccgcgccgccctccaagacgacctccgccgaaggcacctcgaccgccgg
cgggtcgcggccgccgcgctgcggatgatcgaccgcggcgtcttccgcagcggcggcgag
gagtacgccgaaaccaacggctcccacggcgcgaccacgctgctgcgcgaacacgtgaag
atcagcggcgacgagctgaccttctgctaccccgccaaaagcggcctcgtccgctcgctg
agcctgcgcgacggcgaactcgcagccgtcctgaagtcgctccgccgctgccgcaccgga
accccgcgcctgttcgcctaccgcaccgacgacggctggcacgaactgcacgccagcgac
gtcaacgagcggttcaaggaactggccggcgaggagttcacggtcaaggacttccgcacc
tggcacgcgaccgtgctcgccgcggtctccctcgccgcccaggagacgccgacctcccag
cgcggccgggcgagggccgagtcggccgcgatgaaggaggtcgcggaggagctggggaac
actcccgcggtcgctcgccgctcgtatgtcgacccgcgcgtcctgcgggaattcgaagag
ggcaacaccatccaccgcgcattgcgcaaggccgacgccgacgggctcgcggaggaggag
ctacgggagcggatcgaaaaagcggtactccgactgctgcggcgggcctcccgcggatga
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