Amycolatopsis sp. AA4: CU254_23565
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Entry
CU254_23565 CDS
T05278
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyc03021
]
CU254_23565
Transcription machinery [BR:
amyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CU254_23565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_3
HTH_31
MarR_2
HTH_Crp_2
HTH_28
DUF7343
HTH_IclR
MarR
HTH_26
HTH_AsnC-type
KORA
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
ATY13083
UniProt:
A0A2K8M3Z4
LinkDB
All DBs
Position
complement(5086033..5086833)
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AA seq
266 aa
AA seq
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MTAATMTRTRRDDYRHYAALFEEISHLAEDTDEHSRLRRRLIEEHLPLAEHIARRFARRG
QPTEDLLQVARIGLINAVDRYDPARQTDFVAFAVPTVMGEVRRYFRDHTWSVRVPRRLKE
LHLTVGQAATELGQRLGRAPTARELADHLDLDLDEVAEALHAGNAYQASSIDYPAHDDSG
SVALADTLGDEDPEIEKLEDRETLKPLLRSLPERERAILVMRFFSNMTQSQIAERVGLSQ
MQVSRLLARTLSTLRDQLTEASGASR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggcgaccatgacccgcacccggcgcgacgactaccggcactacgcggcgctg
ttcgaggaaatcagccacctggccgaggacaccgacgagcactcccggctgcgccgccgc
ctcatcgaggaacatttgccgctggccgagcacatcgcccgccggttcgcccggcgcggc
cagccgaccgaggacctcctgcaggtcgcgcggatcggcctgatcaacgccgtcgaccgg
tacgacccggcgcggcagaccgatttcgtcgcgttcgccgtcccgaccgtgatgggcgag
gtccgccggtacttccgcgaccacacctggtcggtccgcgtcccgcggcggctcaaagaa
ctccatttgacggtcggccaagcagccacggaactgggccagcgcctgggccgcgcgccc
accgcgcgcgaactcgccgaccacctcgacctcgatctcgacgaggtcgccgaggccctg
cacgccgggaacgcctaccaggcctcctccatcgactacccggcccacgacgacagcggc
tcggtcgcgctggcggacacgctcggcgacgaggacccggaaatcgagaagctcgaggac
cgggaaacgctcaagccgctgctgcggagcctgccggaacgcgagcgcgcgatcctcgtc
atgcggttcttctcgaacatgacgcagagccagatcgccgaacgggtcgggctgtcgcag
atgcaggtttcgcggttgctggcccggacgctgagcaccctgcgggaccagctcaccgag
gcgtccggcgcctctcgctga
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