KEGG   Amycolatopsis sp. AA4: CU254_26265
Entry
CU254_26265       CDS       T05278                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
amyc  Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:amyc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amyc02048]
    CU254_26265
Enzymes [BR:amyc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CU254_26265
Prokaryotic defense system [BR:amyc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CU254_26265
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD DUF1759 CLP1_P AAA_22
Other DBs
NCBI-ProteinID: ATY13540
UniProt: A0A2K8M2P2
LinkDB
Position
complement(5669911..5673120)
AA seq 1069 aa
MAEQLGFSEAEWESVALETLAEQEWQPLPGIAVVQGAENGRASWDDVVLPGRMLAKMREL
NPQVPAEYLEQALAEIIQPTSQDAIAENYRLHQICTQGYRGISYIDADGVEQNPTIRLVS
HQVGDNELLAVNQVTVRTAEVERRFDVVLYLNGMPVAIFELKQAGAAKADLDAAHAQLAT
YLREFPMAFRFAVVTVISDGITARYGTPFTPLNHYSPWNVDDDGKPVQLGEPLDDVHLGT
ELEFLIEGVFNPERFLQLQRNFTAFDGGADGYAKRIAKPHQYFAVTKAVGSTVAAVESNG
KAGVVWHTQGSGKSMEMELYAHLVATQPKLKNPTIIVVTDRKELDGQLYESFNRSRLLNE
SPIKVTTRAQLRDELANRATGGIYFTTLQKFGLSKAEKDAGLEHPLLSDRRNIIVIADEA
HRSHYDDLDGYARHLKDALPNAALIAFTGTPISFEDRNTREVFGRYIDIYDLTRAVDDGA
TVPVYFEPRLVKVKLIDDVTEDDLDKAADEATLGLDEVERAKIEKSVAVINAVYGAPARL
EALAADIVAHWETRSEEMCKFIGSPGKAFIVGATREICANLYDEIVKLKPEWHHDAVDKG
VIKVVYSGTAQDVVPVARHVRRDRQNKVIQKRLRDAEDELQVVLVKDMMLTGFDAPPLHT
LYLDRPLKGALLMQTLARVNRTFRGKPDGLLVAYAPLADNLNKALAEYTDTDRAQKPVGK
NIDEAVALTTTLIASLDQLCAGYPWRSKLDGGPKSWVRAAYGLTNYLRSPGTPGNRPPEG
EEPLGDRFRKLANQLARAWALCAGNQTLDHLRVTAKFYEEVRVWMGKFDASERQAEGKPV
PEEIERMLSTLVATSTASGEIVDIYEAAGLPKPSLSDLGPEFQLKAQSATNPHLAIEALR
ALLVEESDHVTQHNLVRQRAFSERIAELMRKYTNQQLTSAEVIAELIELAKEVAEEGNRG
QFFTPPLSHDELAFYDAVSTNESAVEIQGDDVLAQIARELVAVMQRDVKTDWTVRDDVRA
KLRSSIKRLLVKYKYPPDKQPEAIRLVIEQMEAMAPRYAADGGSGTASR
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggcggagcagctggggttcagtgaggcggagtgggagagcgtcgcgttggagacgctc
gccgagcaggagtggcagccgctcccagggatcgccgtcgtgcaaggcgctgaaaacggt
cgggcctcgtgggacgacgttgtgcttcctggacggatgctggccaagatgcgggagctc
aacccccaagtgccagcggagtacctggagcaggcgctcgcggagatcattcaaccgacc
tcacaggacgcgatcgcggagaactaccggctgcaccagatttgcacccagggctaccgc
gggatcagctacatcgacgccgacggcgtggaacagaacccgacgatcagactggtcagc
caccaggtcggcgacaacgagctgctcgcggtcaaccaggtcaccgtccgtacggcggag
gtcgagcgccgcttcgatgtcgtgctctatctcaatggcatgccggtcgcgatcttcgag
ctgaagcaagcgggcgcggccaaggccgatctggacgccgcgcatgcccagttggcgacc
tacttgcgtgagttcccgatggcgttccggttcgctgtggtgaccgtgatcagcgacggg
atcaccgcccgctacggcacgccgttcacgccgctgaaccactactcgccgtggaacgtc
gatgacgacggcaagccggtgcagctcggcgaaccgctcgacgacgtccacctcggcacc
gagctggagttcctgatcgaaggcgtgttcaatccggagcggttcctccagctgcaacgg
aacttcaccgccttcgacggcggagccgacggttacgcgaagcggatcgccaagccgcat
cagtacttcgcggtcaccaaggcggtcgggtcgacggtcgcggctgtggagagcaacggc
aaggccggcgtcgtgtggcacacccaggggtcgggcaagtcgatggagatggagctgtac
gcccacctcgtggctacgcagcccaaactgaagaacccgaccatcatcgtggtgaccgac
cgcaaggaactcgacgggcagctgtacgaatcgttcaaccggtcccgtctgttgaacgaa
tctccgatcaaggttacgacgcgtgcgcagctgcgcgacgagctggccaaccgcgccacg
ggcggcatctacttcacaacattgcagaagttcgggctcagcaaagccgagaaggacgcc
ggactggagcacccgctgctttcggaccgtcgcaacatcatcgtgatcgctgatgaggcc
caccggagccactacgacgacctcgacggctacgcccgccatctcaaggacgctctgccc
aacgctgcactgatcgcgttcaccggaacgccgatctcctttgaggaccgcaacacccgg
gaagtgttcggccgctacatcgatatctacgacctgacccgcgccgtcgacgacggtgcc
accgttccggtctacttcgagcccaggctcgtcaaggtcaagctgatcgatgacgtcacc
gaggacgacctggacaaggccgcggacgaggcgacgctcgggctcgacgaggtcgagcgc
gcgaagatcgagaagtccgttgcggtgatcaacgccgtgtacggcgccccagcgcgtctg
gaggcgttagcagcagacatcgtcgcgcattgggagacgcggtcggaggagatgtgcaag
ttcattggttctcccggcaaggcgttcatcgtcggggcgacgcgtgaaatctgcgccaac
ttgtacgacgagatcgtcaagctcaagcccgagtggcatcatgacgcggtcgacaagggc
gtgatcaaggtcgtctactccggtaccgcccaggacgtcgtgccggtggcgcggcacgtc
cgccgtgacaggcagaacaaggtcatccagaagcggctccgtgatgccgaggacgagctt
caggtcgtcctggtcaaagacatgatgctgaccggcttcgacgcgcctccgctgcacacc
ctctatcttgaccgtccgctcaaaggcgccttgttgatgcagacattggcgcgggtgaac
cgcacgttccgcggcaagccggacggattgctcgtcgcctacgcgcccttggcggacaac
ctgaacaaggcgctcgccgaatacaccgacaccgaccgagcccagaagccggtcggcaag
aacatcgacgaagctgtcgcgctcaccaccacgctcatcgcatcgctggatcagctgtgc
gccggctacccgtggcggagcaagctcgacggcgggccgaagagctgggtcagggcggcc
tacggcctcacgaactacctccgttccccgggcactccgggcaaccggcctccggagggc
gaggagccgctcggcgaccggttccgcaagctggccaaccagctggcccgggcgtgggcg
ttgtgcgccggcaaccagaccctcgatcaccttcgcgtcaccgcgaagttctacgaagaa
gtccgtgtctggatgggcaagttcgatgcctcggaacggcaggccgagggcaagccagtg
ccggaagagatcgaaaggatgctctccacactggtggcgacctccacggcgtccggcgag
atcgtcgacatctacgaagccgccggcctgcccaaaccgtcgttgtccgacctgggaccg
gaattccagctcaaggcccagtcagcgacgaacccgcacctggcgatcgaggcgttgcgc
gcgctgctcgtcgaagaatcggatcacgtcacccagcacaacctcgtccgccagcgggcg
ttctccgaacgcatcgccgagctgatgcgcaagtacaccaaccagcagctcacttcggca
gaagtcatcgccgagctgatcgagctggccaaggaagtcgccgaggagggcaaccgcggg
cagttcttcactccgccgctgtcccacgatgagctcgcgttctacgacgccgtcagcacc
aacgagtcggccgtcgagattcagggcgacgacgtgctcgcccagatcgcacgcgagttg
gtggcagtcatgcaacgcgacgtcaagaccgactggactgtccgagacgacgtgcgcgcc
aaactccgatcgtccatcaaacgtctgctcgtgaagtacaagtacccgcctgacaagcag
cctgaagctatccggcttgtcatcgagcagatggaagcgatggcaccccgatacgcggct
gacggtggatcaggcaccgcatccaggtag

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