Amycolatopsis sp. AA4: CU254_26435
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Entry
CU254_26435 CDS
T05278
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CU254_26435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_26435
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CU254_26435
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CU254_26435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ATY13568
UniProt:
A0A2K8M1I7
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Position
complement(5712824..5713600)
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AA seq
258 aa
AA seq
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MVNLYRDTGVVLRTHKLGEADRIVTLLTKRHGKVRAVAKGVRRTSSRFGARLEPFGHVDV
QFYPGRSLDVITQVETVDAFALPLVADYQRYTAASAIAETADRLSAEEGEPVLKLYLLVV
GALRALAGGQRDASLVLDAFFLRAMAYAGWAPAITECARCGLPGPHAAFNVAAGGSMCPD
CRIAGSVHPAPEVLTLLDALLQGEWAVAESSPGITRRDASGLVAAHLQWHLERQLRSLPL
VERRAREAAGPGPVGSAG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaacctctaccgcgacaccggggtggtgctgcgcacgcacaagctgggcgaggcc
gaccggatcgtcaccctgctcacgaagcggcacggcaaggtccgggccgtcgcgaagggc
gtgcggcgcacgtcgtcgcggttcggggcgcggctggagccgttcgggcacgtggacgtg
cagttctatcccggccggtcgctcgacgtcatcacccaggtcgagacggtcgacgcgttc
gcccttccgctggtggccgactaccagcgctacaccgcggcgtccgcgatcgcggagacc
gcggaccggctctcggcggaagagggcgaaccggtcctgaagctgtatctgctggtcgtg
ggcgcgctgcgggcgctggccggcgggcagcgggacgcgtcgctggtgctcgacgcgttc
ttcctccgggccatggcctacgcgggctgggccccggcgatcaccgaatgcgcccgctgc
ggcctgcccggcccgcacgccgcgttcaacgtcgccgcgggcggttcgatgtgcccggac
tgccgcatcgccggctcggtgcatcccgcgcccgaggtgctgaccctgctggacgcgctg
ctgcagggggagtgggcggtcgcggaatcgtcgccggggatcacccgccgggacgcgtcc
ggcctggtcgcggcgcacctgcagtggcatctggaacgacagctgcggtcgcttccgctc
gtggagcggcgtgcccgggaggccgccgggcccggcccagtagggtcggccgggtag
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