Amycolatopsis sp. AA4: CU254_29455
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Entry
CU254_29455 CDS
T05278
Name
(GenBank) hypothetical protein
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03030
DNA replication
amyc03430
Mismatch repair
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CU254_29455
03430 Mismatch repair
CU254_29455
03440 Homologous recombination
CU254_29455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_29455
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_29455
Enzymes [BR:
amyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CU254_29455
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CU254_29455
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CU254_29455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
DNA_pol3_beta_2
DNA_pol3_beta_3
MerR-DNA-bind
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
ATY14087
UniProt:
A0A2K8M0B1
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All DBs
Position
6363271..6364305
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AA seq
344 aa
AA seq
DB search
MPDLLTIGAFARRCGLTASALRFYADSGLVRPIRVDEESGYRYYSPGQVSAALLVRRLRE
IGLPLERVSAVLAAGPDEAARIIDDHVAGLVSQVQQARETAAAVKATLGATAPAPSVQVT
GPVFTAAVEQVLTATTQDLPVLNGVHLEVSPAAIVLTATDRYRLSTRTLVPAEPSASTWT
ATADADDLRLAMPWTRRQHDLHLSVRADEIWFQGDDAVRTCRTLSEDFPDYRLMLASLPE
VLTRAVISRNALVAGLERQYTAQIQLDLSATAITVGIERIPADVTGPPITLSFAVSTLHP
AISTAVGPDVMLDVAGPHLPVVVRSADDGDLTTLAMPVKDISGC
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacctgctgaccatcggagcgttcgcccgccgctgcggcctgaccgccagcgcg
ctgcgcttctacgccgattccggcctcgtgcggccgatccgggtcgacgaggaatccggc
taccgctactactccccgggccaggtctcggccgcgctgctcgtccggcggttgcgggag
atcggcctgccgctggagcgggtcagcgcggtcctcgccgccggaccggacgaggcggcg
cggatcatcgacgaccacgtcgccgggttggtatctcaggtgcagcaggcgcgggaaacc
gccgcggcggtgaaggccacgctgggcgccaccgcaccggcaccgtcggtccaggtcacc
ggcccggtgttcaccgctgccgtcgagcaggtgctcaccgcgaccacgcaggacctcccg
gtgctgaatggcgtgcacctggaagtctcccccgcggcgatcgtgctcaccgccaccgac
cggtaccggctctcgacccgcacgctggtccccgccgagccgagcgcgtccacctggacc
gccaccgcagacgccgacgacctgcggctcgcgatgccatggacgcgccgtcaacacgac
ctgcacctgagcgtccgcgccgacgagatctggttccagggcgacgacgcggtacgaacc
tgccgcacactttccgaggactttcccgactaccggctgatgctcgcgtcgctgccagaa
gtccttacgcgggcggtgatatctcgtaacgcgctcgtggcaggtctggagcgccaatac
accgcgcagatccaactagacctctccgccaccgcgatcacggtgggcatcgaaagaatc
cccgcggacgtcacgggcccgccgatcacgctctccttcgccgtcagcacgctgcacccg
gcgatcagcaccgcagtcggaccggacgtgatgctggacgtcgcgggcccgcacctgccg
gtagtcgtgcgctccgccgacgacggcgacctgaccacccttgccatgccagtgaaagac
atctcaggttgttag
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