Amycolatopsis sp. AA4: CU254_30040
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Entry
CU254_30040 CDS
T05278
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyc03016
]
CU254_30040
Enzymes [BR:
amyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CU254_30040
Transfer RNA biogenesis [BR:
amyc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CU254_30040
Prokaryotic type
CU254_30040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ATY16693
UniProt:
A0A2K8MDY5
LinkDB
All DBs
Position
complement(6497622..6498530)
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AA seq
302 aa
AA seq
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MSRRELVVLGSASQTPTRHRNHNGYLLRFDTDGILFDPGEGTQRQLMYAGATASELTHLC
VTHFHGDHSLGLAGIIQRLSLDNVAHPVRCHYPASGQQYFDRLRHSTSFHERAELVPLPI
SAPGPLGGALSAYPLEHRIDCFGYRYTEPDGIRMLPDALAAAGVQGPAVRKLQADGVLET
ANGVVRLEDVSVPRRGQVVAFVMDTRLCPGAFACAREADLLIAESTFRADDADLAYRYGH
LTSTDAGRLAAESGARKLLLTHFSQRYPYEEADRFRDEAAKVFDGEIHVARDLDVVPLPP
RR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcgagctagtcgtgctgggctcggcgagccagacgccgacccggcaccgc
aaccacaacggctacctgctgcgcttcgacaccgacggcatcctcttcgatccgggcgag
ggcactcagcggcagctgatgtacgccggtgcgacggcgagcgaactcacgcacctgtgc
gtgacccacttccacggcgaccacagcctcggcctcgccggcatcatccagcggttgtcc
ctggacaacgtcgcgcatccggtgcgctgccactacccggcgtcgggtcaacagtacttc
gaccggctgcggcactcgacgtcgttccacgagcgcgccgagctggtcccgctgccgatc
tccgcgccgggtccgctcggcggcgcgctgtcggcatacccgctggaacaccgcatcgac
tgcttcggctaccgctacaccgaaccggacggaatccggatgctgccggacgcgctcgcc
gccgcgggcgtccaaggccccgctgtccggaagctccaggccgacggcgtgctcgagacc
gcgaacggcgtggtccggctcgaggacgtgagcgtgccgcgccggggccaggtggtcgcg
ttcgtgatggacacgcgcctgtgcccgggcgcgttcgcctgcgcgcgagaggcggacctg
ctgatcgccgaatcgaccttccgcgccgacgacgccgacctggcctaccgctacggccac
ctgaccagcaccgacgccggccggctcgccgcggagtcgggggcccggaagctgctgctg
acccacttctcgcagcgctacccgtacgaggaggcggaccggttccgcgacgaagcagcg
aaggtgttcgacggggagatccacgtggcccgcgacctggacgtggtgccgctgccgccg
cgccggtga
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