Amycolatopsis sp. AA4: CU254_34135
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Entry
CU254_34135 CDS
T05278
Name
(GenBank) type IV secretion protein Rhs
Organism
amyc
Amycolatopsis sp. AA4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
RHS
WXG100
T7SS_signal
PPE
DASH_Dad2
EspA_EspE
EspB_PPE
Motif
Other DBs
NCBI-ProteinID:
ATY14885
UniProt:
A0A2K8MAI5
LinkDB
All DBs
Position
complement(7397547..7401944)
Genome browser
AA seq
1465 aa
AA seq
DB search
MSNPLVAQRQDSTTWHSGINILDDAAGVYDGVQSGSWVDAGISALGAGLDMLTVVMNPVG
TLISYGLNWLIEHVKPLQDALNQLAGDGDQISAYSETWKNIGKATQQAAKDLAATVQQDT
ANWKGAAADAYRANIGKKIDHINAAATCANTISTVVEVVGVITAAVRCLVRDMITQAVGD
FIQDALEEVCSLGLGTPVVVAQVVEQVSAWLEKIGALIKKLINSVEKLRPLMSKLEEIFA
SIKKVLAELHGRPGEGDATHVSSADEPHSGKPGEHSPGDHEPPGGKDGTDPASANAPGDD
GANPGKPKGNDSDPLSQDGKKPGAEQEANGRCGGREPIDLATGDMFLVQFDVTLDGVLPL
VLERTHISAYRSGRMFGPSWASTLDQRVVTDGEAVYYAAPDGAIVTFPAPPADGRPVSPL
FGPRWLLTRRPDGFSLDRTADGTTLYFPAGNGNTAHLARIADRNGNEIVFVRDDTGVVTN
VRHSGGYEVLVESSAGLVRSLRLGGTAADPIPLVSFDYDEAGRLREVVNSSRKPYAFAYD
HAGRVTKWVDRNGEWYSYEYDHRGRCVATDGSGGAVSGTLEYDDENRLTVETDSQGRVTR
HCFNERRQLIRQVDPLGNETRQVWDGYDRLAATVDPLGRTTAYGYDDRGNLVTATRPDGS
QTLVTYGEFDLPVVRIDPDGGVWRYAYDERGNPVALTDPAGAVVSYGRNERGHLTSVTDA
LGNVRRIRADAAGLPVEITDPLGGVTRCVRDPFGRPSEISDPLGQVRRFRWTVEGRLSSR
TMPDGSVERWIRDAEGNEVAYVDALGQTTKTWLTHFDLPAAQLEPDGGRYEFRYDTEMRL
LSTTNPQGLVWSYEYNEAGKLIREIDYNGREVRYAYDAAGQLTSQTNGAGETVEFRYDLL
GNVVERRHAGGVSRFEYNAARQVVRAANEASEVVLQRDPLGRVLAETGNGRTVSSRYDAA
GRRIARRTHAGAESWWGYDAAGRPTSLRTAARTMSFSYDPAGHLVEWLLDSGAMLAQSWD
SNDRLVAQTVSTVAGRAGAAGSARRTQHRAFQFRADGVVSAIEDQLTGARRFDLDPLGRA
TRVTGAGWHESYQYDASGNVRHAEHGHPHAASALSGPRGYAGTLLREAGPVSYQYDAQGR
VVLAHKKRLSRPPAVWRYSWDPDDQLVELATPDGVRWRYLYDPFGRRIAKLRLAADGSVA
GRVDFLWDGHVLAEQVAAGRVTTWDWDSAEFRPLAQRERTIAADRPQDRVDEEFYAIVTD
FAGAATELIDPGGNVAWHADRTLWGYRAGASQGGVSVPMRFPGQYHDEESGLYYNYFRYY
DPETGRYASPDPLGLHGGDNPHAYVANPTSWLDPFGLSANQRRWIDHSDGWRLGIDRFPI
GGGSDFEIHVYRNGEEKGLWGSEGWFNKHGKPASAPDDIPPHLEGRLRNLSIEEMRRDGR
LPEKGRADLSGDKWKRPRITGKCKE
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacccgttggtggcacagcggcaggattcgaccacctggcacagcgggatcaac
atcctcgacgacgccgcgggcgtgtacgacggggtgcagtccggttcgtgggtcgacgcg
gggatctccgcgctcggggccgggctggacatgctgaccgtcgtgatgaatccggtcggc
acgctgatctcctacgggctgaactggctgatcgagcacgtgaagccgttgcaggacgcg
ctcaaccagctggccggggacggcgaccagatctcggcgtattcggagacctggaagaac
atcgggaaagccacgcagcaggcggcgaaggatctggccgcgacggtccagcaggacacc
gcgaactggaagggcgcggcggccgacgcgtaccgggcgaatatcgggaagaagatcgac
cacatcaacgccgccgcgacgtgcgcgaacacgatcagcacggtggtcgaggtcgtcggc
gtgatcaccgccgcggtgcgctgcctggtccgcgacatgatcacccaggcggtcggcgac
ttcatccaggacgcgctggaggaggtgtgctcgctcgggctcggcacgccggtcgtggtc
gcgcaggtcgtcgagcaggtgtcggcttggctggagaagatcggcgcgctgatcaagaag
ctgatcaattcggtcgagaagctgcggccgctgatgtcgaagctcgaggagatcttcgcg
tcgatcaagaaggttctcgccgaattgcacggcaggccgggtgaaggcgatgcgacccac
gtgtcctcggccgacgaaccgcattccggcaagcccggcgagcacagtcccggcgaccac
gaaccgcccggcggaaaggacggcaccgacccggcgagcgcgaacgctccgggcgacgac
ggcgcgaatccgggcaagcccaagggaaacgactccgatccgctcagccaggacggcaag
aaacccggagccgaacaagaggccaacggacgctgcggcggccgggaaccgatcgacctc
gccaccggcgacatgttcctggtgcagttcgacgtcacgctcgacggcgtgctgccgctc
gtgctggagcgcacgcacatctcggcttaccggtccggccggatgttcggcccgtcctgg
gcttcgactctcgaccagcgagtggtcaccgacggcgaggccgtctactacgcggcaccg
gacggtgccatcgtgaccttccccgcgccaccggcggacgggcggccggtcagcccgctg
ttcggaccccgctggttgctcacccggcggcccgacggcttctccctcgaccgcacggct
gacggaaccactctgtatttccccgccggcaacggaaacaccgcgcatctcgcccggatc
gcggaccgcaacggcaacgagatcgtgttcgtgcgcgacgacaccggggtcgtgaccaac
gtccggcattcgggcgggtacgaggtgctggtcgaaagctcggcggggctggtgcgttcg
ctgcggctgggcgggaccgcggcggacccgattccgttggtgagcttcgattacgatgaa
gctggcaggctgcgggaggtcgtcaactcgtcgcgcaagccttatgccttcgcatacgat
cacgccggccgggtaacgaaatgggtggaccggaacggggaatggtattcctacgaatac
gaccaccgcggccggtgcgtcgccaccgacggatccggcggcgcggtgtccggcacgctc
gagtacgacgacgaaaaccggctgaccgtcgagaccgattcgcagggccgggtcacgcgg
cactgcttcaacgagcggcggcagctgatccgccaggtcgatccgctcggcaacgagacc
cgccaggtctgggacggctacgaccggctggccgcgacggtcgacccgctgggccggacc
accgcctacggctacgacgaccgcggcaacctggtgacggcgacacgcccggacggcagc
cagaccctggtcacctacggcgagttcgaccttccagtggtgcggatcgatccggacggc
ggcgtctggcgctacgcctacgacgagcgcggcaatccggtcgcgctgaccgatcccgcc
ggcgcggtcgtcagctacggccggaacgaacgcgggcacctgacgtcggtcaccgacgcg
ctggggaacgtccggcggatccgggccgacgcggccgggctgccggtcgagatcaccgat
ccgctcggcggcgtgacccgctgcgtgcgcgatccgttcggcaggccgagcgagatcagt
gatccgctcggccaggtgcggcggttccggtggacggtggagggcaggctcagttcccgg
acgatgcccgacggcagcgtcgagcggtggatccgcgacgcggagggcaacgaggtcgcc
tacgtcgacgcgctggggcagacgaccaagacgtggctgacccatttcgacctgcccgcc
gcgcagctcgaaccggacggcgggaggtacgaattccgctacgacacggaaatgcgcctg
ctgtccacgaccaatccgcagggcctcgtctggtcttacgagtacaacgaggccgggaag
ctgatccgggagatcgactacaacggccgggaagtgcggtacgcctacgatgccgcgggg
cagctgaccagccagacgaacggggccggcgagaccgtcgaattccgttacgacctgctg
ggcaacgtcgtcgaacggcggcacgcgggcggggtgtcgaggttcgagtacaacgcggcc
cggcaggtcgtgcgcgcggccaacgaagcgtcggaagtggttctgcagcgcgatccgctc
ggccgggtgctcgcggaaaccggcaacgggcggaccgtctcttcccgctacgacgcggcg
ggcaggcggatcgcgcgccggacccacgccggtgcggaaagctggtggggttacgacgcg
gcgggcaggccgacctcgttgcgcaccgcggcgcgcacgatgtcgttcagctacgacccg
gccgggcatctcgtggaatggctcctcgacagcggggcgatgctggcccagtcctgggac
agcaacgaccggctggtcgcgcagaccgtgagcaccgtcgccgggcgggcgggagccgcc
ggatcggcgcggcgtacccagcaccgcgcgttccagttccgggcggacggggtggtctcg
gcgatcgaggaccagctcaccggggcgcgccggttcgacctcgacccgctggggcgggcg
acccgggtgacgggtgctggctggcacgagtcgtaccagtacgacgcgagcgggaacgtg
cggcacgccgagcacgggcatccgcacgcggcgagcgcgttgtccggcccgcgcggctac
gccggcaccttgctgcgcgaggcgggaccggtcagctaccagtacgacgcacagggccgg
gtcgtgctggcgcacaagaagcggttgtcccggccgcccgcggtctggcgctactcctgg
gatcccgacgatcagctggtcgaattggcgactccggacggcgtgcgctggcggtacctg
tacgacccgttcggccgccggatcgcgaaactccggctcgccgccgacggttcggtcgcc
ggccgggtggatttcctgtgggacggccacgtgctggccgaacaggtcgccgcgggccgg
gtgacgacgtgggactgggattccgccgagttccgtccgctcgcccagcgcgaacggacg
atcgccgcggaccgcccgcaagaccgggtcgacgaggagttctacgcgatcgtcaccgac
ttcgccggtgccgcgaccgagctgatcgacccgggcggaaacgtcgcctggcacgccgac
cggaccctctggggataccgcgccggggcaagccagggtggcgtttccgtgccgatgcgg
ttccccggccagtaccacgatgaggaaagcggcctgtactacaactacttccgctattac
gacccggagaccggccggtatgcctcgcccgacccgctcggcctgcacggcggcgacaac
ccgcacgcgtacgtggcgaacccgaccagctggctcgacccgttcgggctgtcggccaac
cagcggcgctggatcgaccacagcgacggctggcggctcggcatcgaccggttcccgatc
ggcggcggttcggacttcgagatccacgtgtaccgcaacggcgaggagaaggggctgtgg
ggcagcgagggctggttcaacaagcacggcaagcccgcgtccgcgccggacgatattccg
ccgcatctggaaggtagactgcgcaacctctccatcgaggagatgcgccgggacgggcgt
cttccggagaaaggccgcgccgatctgtccggcgacaagtggaagcggcccaggatcacc
ggcaagtgcaaggaatga
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