Amycolatopsis sp. AA4: CU254_34855
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Entry
CU254_34855 CDS
T05278
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_34855
Enzymes [BR:
amyc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CU254_34855
DNA repair and recombination proteins [BR:
amyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CU254_34855
Prokaryotic type
CU254_34855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATY15003
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Position
complement(7550127..7551485)
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AA seq
452 aa
AA seq
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MTMEAPVVLWFRRDLRLRDHAALFEAAKHSKHLLALYVLDDRLLEPAGSPRIAFLLNSLR
ELDKALSGRLMVRCGDPVREVVAAAREIRAAAVHVSADTAPYGRERDDAVAEALAEHRIQ
WVPTGSPYAVTPGRVTKPDGTPYRVFTPFYRAWAQHGWPRPADTNVSIVDWVKPASSEPL
PEPPEVECELPPAGEEAALAGWQEFLADGLAEYATERDRPDHAGTTRLSPYLRWGAIHPR
TMLADLAGNRSEGAQALRSELCWREFHADVLWHRPETARRNYDQRFDGMRYDTGKTAREM
FALWREGRTGYPIVDAGMRQLLAEGWMHNRVRMIVASFLVKDLHLPWWWGARHFMKHLVD
GDLASNQLNWQWVAGSGTDAAPYFRIFNPTTQGQKFDPKGDYVRRYVPELRGVAGKAVHV
LKERPEGYPQPIVDHAEERQVALQRYGAITGS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagcgccggtcgtgctgtggttccgccgggatctgcgattgcgggaccac
gccgccctgttcgaggcggccaagcacagcaagcacctgctggcgctgtacgtgctggac
gaccggttgctcgaaccggccggttcgccgcggatcgcgtttctgctgaattccttgcgg
gaactggacaaagcgttgtccggacggttgatggtgcggtgcggcgatccggtgcgagag
gtcgtcgcggcggcgcgggaaattcgggcggcggcagtgcatgtctctgcggataccgca
ccctatgggcgggagcgtgacgatgccgtggctgaagctttggcagagcatcgaattcag
tgggtgccgacgggttctccgtacgccgtgacgccagggcgggtcaccaagccggacggg
acgccgtatcgggtcttcactccgttctaccgggcctgggcgcagcacggctggcctcgt
ccggcggacaccaatgtgtctattgtggactgggtcaagcccgcttcttcggaacccttg
ccggaacctccggaggtggagtgcgagctgccgcccgcgggggaggaagccgcgctggcg
gggtggcaggagtttctcgccgacggtctcgcggagtatgcgaccgaacgcgatcgtccg
gatcatgctggcaccaccaggctttccccctatctgcgctggggcgcgatccatccgcgg
acgatgctggccgacctggccggaaaccggtccgagggcgcgcaggccttgcgctccgag
ctgtgctggcgcgagtttcacgccgacgtcctgtggcaccggccggaaaccgcgcggcgg
aattacgatcagcgtttcgacggaatgcgttacgacaccggaaaaaccgcgcgggagatg
ttcgcgttgtggcgcgaggggcggacgggctacccgatcgtcgacgccggaatgcggcag
ctgctggccgagggctggatgcacaaccgggtccggatgatcgtggcgagtttcctggtg
aaggacctgcatttgccgtggtggtggggggcgcggcacttcatgaagcatctggtcgac
ggcgacctggcgtcgaatcagctgaactggcaatgggtcgctggctccggaacggacgcc
gcgccgtacttccggatcttcaatccgaccacgcaggggcagaaattcgacccgaagggc
gattacgtgcgccggtatgtcccggaattgcgtggtgtggcgggcaaagcggtgcacgtg
ctgaaagagcgtccagaggggtatccgcagccgatcgtggaccacgcggaggaacggcag
gtcgcactgcagcggtacggggcgattaccgggtcttag
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