Amycolatopsis sp. AA4: CU254_36825
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Entry
CU254_36825 CDS
T05278
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03030
DNA replication
amyc03430
Mismatch repair
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CU254_36825 (dnaN)
03430 Mismatch repair
CU254_36825 (dnaN)
03440 Homologous recombination
CU254_36825 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyc03032
]
CU254_36825 (dnaN)
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_36825 (dnaN)
Enzymes [BR:
amyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CU254_36825 (dnaN)
DNA replication proteins [BR:
amyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CU254_36825 (dnaN)
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CU254_36825 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_3
DNA_pol3_beta
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ATY15341
UniProt:
A0A2K8M3X9
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All DBs
Position
7958059..7959132
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AA seq
357 aa
AA seq
DB search
MDLTSFVRPLAAAVTAAARLLSKQARLRLRANADGLVVSGNDRDLAVQLSCPATTHLDGE
VVVPAAPFAETVRMLDVDQVRLVVEGTRLAIRTDSARFALPLLDRDLLHDPSPPPLLSKV
DGLALEAALRTVAGTAAKDDPLPVFTGVRVQSIGGELCLTACDRYRMAVARLPLREVRDP
IDVLVPATLLTEAARHGSGAMGLHADDRHFALSWPGGTVTTAVLDAGFLSADSIPSNAID
TEVEVSADELAAAIRRVGVYSEDRRVLTLEVGDAHLRLASARQDTGEAEEHLKANVCGGR
TSPSFHARYLLDALAPFSGERVRLAIQPGLRACVLTPADEDGREVALMYYLMPMLRR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggatctcacttccttcgtccgaccgctagcagccgccgtgaccgccgccgcccgcctc
ctctcaaagcaagcccgcctgcgcctgcgggccaacgctgacggcctcgtcgtgtccggc
aacgatcgcgacctggccgtccagctgtcctgccccgcgaccacgcacctcgacggcgaa
gtcgtagtcccagcagcgcctttcgccgaaacggtccgcatgctggacgtcgaccaggtc
cgcttggtcgtggaaggaacccgcctcgcgatccggacagacagcgcccggttcgccctg
cccctgctggaccgcgacctgctccacgatccgtccccgccacccttactgtccaaagta
gacggtttggccttggaagcggccttgcgcaccgtcgcgggcaccgccgcgaaggacgac
ccgctcccggtcttcaccggcgtacgagtgcagtccatcggcggcgaactctgcctgact
gcttgcgaccgctaccgcatggccgtagcccgtctgccgctgcgagaagtccgggacccc
atcgacgtcctggtcccagcgaccctcctgaccgaagccgcccgccacggctccggcgcc
atgggactgcacgccgatgaccgccacttcgccctgagctggcccggcggcacggtcacc
accgcggtcctggacgcgggcttcctgtccgcggactccatcccgtccaatgcgatcgac
acggaggtcgaggtaagcgccgacgagctggccgccgccatccgccgagtcggcgtctac
tccgaagaccgccgagtcctgaccctggaagtcggcgacgcccacctccgcctggccagc
gcccggcaagacaccggagaagcagaagaacacctgaaagcaaacgtttgcggcggccgg
acgtccccgtccttccacgcccgctatctgctggacgctctcgccccgttctccggagaa
cgagtccgcctggcaatccagccagggttgcgggcgtgcgtcctgaccccggccgacgag
gacggacgggaggtggccttgatgtactacttgatgccaatgctgcgccggtga
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