Amycolatopsis sp. AA4: CU254_37130
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Entry
CU254_37130 CDS
T05278
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CU254_37130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_37130
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CU254_37130
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CU254_37130
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
zn-ribbon_14
Toprim_2
HHH_8
HHH_3
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ATY15393
UniProt:
A0A2K8MAB4
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Position
complement(8015816..8016412)
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AA seq
198 aa
AA seq
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MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQDVLGKVKEGVQFCEICG
NVSEQETCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ
LRMRQLLQRIGEADVKEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPMGGDL
EFADELTLGRALSGRRAL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgagggtgtcgtccaggacctgatcgacgaactgggccggttgcccggcgtcggt
ccgaagagtgcccagcgcatcgcgttccacctgctggccgccgaccccgcggacatcgcg
cggctgcaggacgtgctgggcaaggtcaaggaaggcgtgcagttctgcgagatctgcggc
aacgtctcggaacaggaaacgtgccggatctgccgggacgaacggcgcgacctcacggtg
atctgcgtggtcgaggagccgaaggacgtcctggcggtcgagcggacccgcgagttcaag
ggccgctaccacgtcctgggcggcgcactcgacccgctctccggcatcggccccgagcag
ctgcggatgcggcagctgctgcagcgcatcggcgaggcggacgtcaaggagatcatcatc
gcgaccgacccgaacaccgagggcgaggcgacggccacgtacctggtgcggatgctgcgc
gatttccccgggctgtcggtgacgcgactggcgtcggggttgccgatgggcggggatttg
gagttcgcggacgagctgactctgggacgcgcgttgtccggtcgccgcgcgctgtaa
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