Amycolatopsis sp. AA4: CU254_38655
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Entry
CU254_38655 CDS
T05278
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyc03400
]
CU254_38655
DNA repair and recombination proteins [BR:
amyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CU254_38655
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ATY15652
UniProt:
A0A2K8M4T6
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All DBs
Position
8331539..8331967
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AA seq
142 aa
AA seq
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MTRVERLVTTSAVSARMSKQKSRNTGIEMALRKILHAAGYRYRVHRRPVKGVRREADLVF
GPARVAVFVDGCFWHGCPEHGTWPKNNADYWRTKIETNRRRDANTDALLLEAGWLSVRIW
EHEATDVAATRVIETVEERRPH
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgtggagcggctggtaacgacttccgcggtgagcgcccgcatgagcaaacag
aagtcccgcaacaccgggatcgaaatggcgctgcgcaagatcctgcacgccgccgggtac
cgctaccgagtgcaccgacgtccggtgaaaggcgtccgccgcgaggctgatctggtgttc
ggccccgcgcgagtcgcggttttcgtggacggctgcttctggcacggctgccccgaacac
ggaacctggccgaagaacaatgccgattattggcggaccaagatcgaaaccaaccgccgc
cgagacgcgaataccgacgcgctgctgctcgaagcgggctggctgtcggtgcgaatctgg
gaacacgaggcgaccgacgtcgccgcgacgcgggtgatcgagaccgtcgaggaacgccgt
ccccattaa
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